BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09762 (UTR included)
(1726 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3193_C1 1774 0.0
>BF14_3193_C1
Length = 995
Score = 1774 bits (895), Expect = 0.0
Identities = 954/976 (97%), Gaps = 12/976 (1%)
Strand = Plus / Plus
Query: 490 ttgttattaacatgaagtggacgagaccagaaactgtccctctggggagagtttggagtc 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 ttgttattaacatgaagtggacgagaccagaaactgtccctctggggagagtttggagtc 91
Query: 550 gctttgaaggaaaacagagaaatggcaagcccgcagaaatgtatcagatagtagacatga 609
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 92 gctttgaaggaaaacagagaaatggcaagcctgcagaaatgtatcagatagtagacatga 151
Query: 610 gcgagtccgtgaggaggcagtgcctcgacatgatgcaggagacattcctccgagacgagc 669
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gcgattccgtgaggaggcagtgcctcgacatgatgcaggagacattcctccgagacgagc 211
Query: 670 cgctctcactggcgttaaatataaaaacagacgcggaatctgtcacatcgatacgtaaca 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 cgctctcactggcgttaaatataaaaacagacgcggaatctgtcacatcgatacgtaaca 271
Query: 730 attgggaggagatgctctcacagaacatttccatcgcttgtttcactgaagaagaggggc 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 attgggaggagatgctctcacagaacatttccatcgcttgtttcactgaagaagaggggc 331
Query: 790 gtaccaaggagctggtgggattcaacatacttatagtgaagaccaaggaagacggtcacg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtaccaaggagctggtgggattcaacatacttatagtgaagaccaaggaagacggtcacg 391
Query: 850 aagagtttgaaaatgtcaaaggtgaaaaatgggagaagcttctgaagaccctcatcacgg 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aagagtttgaaaatgtcaaaggtgaaaaatgggagaagcttctgaagaccctcatcacgg 451
Query: 910 ccgaggagctggtggatattttcagtcattatgacgttgatacttacctgtcctcgagcg 969
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 452 ccgaggagctggtggatattttcagtcattatgatgtcgatacttacctgtcctcgagcg 511
Query: 970 gactgacagtgtcgccagcccaccgaggacagaacatcggggcgaggatgatacaagtca 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gactgacagtgtcgccagcccaccgaggacagaacatcggggcgaggatgatacaagtca 571
Query: 1030 gagaggacatgtgtaaagcgttcggtatcaaggcggtgtccaccgtgttcacggccacct 1089
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 572 gagaggacatgtgtaaagcgttcggtatcaaggccgtgtccaccgtgttcacggccacct 631
Query: 1090 catcacaggtcctggcagcgaaatgtggatacgaggtcctcgccgcgctgccctacaccc 1149
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 632 catcacaggtcctggcagcgaaatgtggatacgaggtcctcgccacgctgccctacaccc 691
Query: 1150 acatgctgcagtacgggattgacctgactatgagtgagacccccctcgctaaagtcatgg 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acatgctgcagtacgggattgacctgactatgagtgagacccccctcgctaaagtcatgg 751
Query: 1210 gaaagaaatactattgatgcacattttagtatagaaatgtgaccttgaattatatatata 1269
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 752 gaaagaaatactattgatgcacattttagtatagaaatgtgaccttgaattatacccata 811
Query: 1270 tatatataatgtaatatatatatgagacacttttgtatcccagttagagtgacaggtctt 1329
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 t------------atatatatatgagacacttttgtatcccagttagagtgacaggtctt 859
Query: 1330 tttatctgtcttcaaataatatatttttataatgcttatgggaaatgtaattttaattga 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tttatctgtcttcaaataatatatttttataatgcttatgggaaatgtaattttaattga 919
Query: 1390 acaaatgaaacaaataaagttttttacgaataatttattgttacagacaaacatacaaaa 1449
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 agaaatgaaacaaataaagttttttacgaataatttattgttacagacaaacatacaaaa 979
Query: 1450 aatatatgtgttctgc 1465
||||||||||||||||
Sbjct: 980 aatatatgtgttctgc 995
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 254,993
Number of extensions: 12128
Number of successful extensions: 12128
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12126
Number of HSP's successfully gapped: 2
Length of query: 1726
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1709
Effective length of database: 8,119,229
Effective search space: 13875762361
Effective search space used: 13875762361
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)