BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09798 (UTR included)
(2608 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3304_C1 1586 0.0
BF01047B1C10 880 0.0
BF01028A2D12 444 e-124
>BF14_3304_C1
Length = 873
Score = 1586 bits (800), Expect = 0.0
Identities = 810/814 (99%)
Strand = Plus / Plus
Query: 435 gaaataaagttgcgtgccttgtttttgttgtaaatttaaaatcaagtttggtacctatag 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaaataaagttgcgtgccttgtttttgttgtaaatttaaaatcaagtttggtacctatag 61
Query: 495 ggcaaaatgtccaatttatgttcaaggattgtgtcaaaacctccgaaaagattaactgag 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggcaaaatgtccaatttatgttcaaggattgtgtcaaaacctccgaaaagattaactgag 121
Query: 555 aatagagatagtatgtcagtcgcacaaactaacacttggatgaatgcggaaaacataaac 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aatagagatagtatgtcagtcgcacaaactaacacttggatgaatgcggaaaacataaac 181
Query: 615 aatggcggtggtttgtcgttatcacccccacatacaatttctcaacgtgaaacggcaatg 674
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 182 aatggcggtggtttgtcgttatcacccccacatacaatttctcaacgtgaaacagcaatg 241
Query: 675 caggtgtcacaatgttatagtggcccaccatcaccatgtggttcatcaagttcaaccccc 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caggtgtcacaatgttatagtggcccaccatcaccatgtggttcatcaagttcaaccccc 301
Query: 735 tcacctacgttatccccagcaccacccccagggacagcaaccctagatcctaattggcaa 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcacctacgttatccccagcaccacccccagggacagcaaccctagatcctaattggcaa 361
Query: 795 gctacaaagcctacaattagagaaagaaatgcagctatgtttaacaatcagctaatggct 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gctacaaagcctacaattagagaaagaaatgcagctatgtttaacaatcagctaatggct 421
Query: 855 gatatcacgttcattgttggaagtcctggacatacacaagttataccagctcataaatat 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gatatcacgttcattgttggaagtcctggacatacacaagttataccagctcataaatat 481
Query: 915 gtattagcaacagggagttcagtattctatgcaatgttctatggtggtcttgctgaatgt 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtattagcaacagggagttcagtattctatgcaatgttctatggtggtcttgctgaatgt 541
Query: 975 aaacaagagatagaagtgccagatgttgaaccatcagccttcctcgcattacttaagtat 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaacaagagatagaagtgccagatgttgaaccatcagccttcctcgcattacttaagtat 601
Query: 1035 ttatattgtgacgagattcaattagaagctgatacagtattatcaacattatatgttgcc 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttatattgtgacgagattcaattagaagctgatacagtattatcaacattatatgttgcc 661
Query: 1095 aagaaatatatagttcctcatttggcaagggcgtgtgtgaactatttggaaactagtctg 1154
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 662 aagaaatatatagttcctcatttggcaagggcatgtgtgaactatttggaaactagtctg 721
Query: 1155 actgcaaaaaatgcatgtttgcttttaagccaatccagattatttgaggaacctgaatta 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 actgcaaaaaatgcatgtttgcttttaagccaatccagattatttgaggaacctgaatta 781
Query: 1215 atgcagaggtgttgggaagtaattgatgcccagg 1248
||||||| |||||||||||||||||||||||||
Sbjct: 782 atgcaganntgttgggaagtaattgatgcccagg 815
>BF01047B1C10
Length = 793
Score = 880 bits (444), Expect = 0.0
Identities = 447/448 (99%)
Strand = Plus / Plus
Query: 436 aaataaagttgcgtgccttgtttttgttgtaaatttaaaatcaagtttggtacctatagg 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaataaagttgcgtgccttgtttttgttgtaaatttaaaatcaagtttggtacctatagg 60
Query: 496 gcaaaatgtccaatttatgttcaaggattgtgtcaaaacctccgaaaagattaactgaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaaatgtccaatttatgttcaaggattgtgtcaaaacctccgaaaagattaactgaga 120
Query: 556 atagagatagtatgtcagtcgcacaaactaacacttggatgaatgcggaaaacataaaca 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagagatagtatgtcagtcgcacaaactaacacttggatgaatgcggaaaacataaaca 180
Query: 616 atggcggtggtttgtcgttatcacccccacatacaatttctcaacgtgaaacggcaatgc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggcggtggtttgtcgttatcacccccacatacaatttctcaacgtgaaacggcaatgc 240
Query: 676 aggtgtcacaatgttatagtggcccaccatcaccatgtggttcatcaagttcaaccccct 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggtgtcacaatgttatagtggcccaccatcaccatgtggttcatcaagttcaaccccct 300
Query: 736 cacctacgttatccccagcaccacccccagggacagcaaccctagatcctaattggcaag 795
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 301 cacctacgttatccccagcaccacccccagggacagcaacccttgatcctaattggcaag 360
Query: 796 ctacaaagcctacaattagagaaagaaatgcagctatgtttaacaatcagctaatggctg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctacaaagcctacaattagagaaagaaatgcagctatgtttaacaatcagctaatggctg 420
Query: 856 atatcacgttcattgttggaagtcctgg 883
||||||||||||||||||||||||||||
Sbjct: 421 atatcacgttcattgttggaagtcctgg 448
Score = 527 bits (266), Expect = e-149
Identities = 269/270 (99%)
Strand = Plus / Plus
Query: 885 catacacaagttataccagctcataaatatgtattagcaacagggagttcagtattctat 944
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 524 catacacaagttataccagctcataaatatgtactagcaacagggagttcagtattctat 583
Query: 945 gcaatgttctatggtggtcttgctgaatgtaaacaagagatagaagtgccagatgttgaa 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gcaatgttctatggtggtcttgctgaatgtaaacaagagatagaagtgccagatgttgaa 643
Query: 1005 ccatcagccttcctcgcattacttaagtatttatattgtgacgagattcaattagaagct 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ccatcagccttcctcgcattacttaagtatttatattgtgacgagattcaattagaagct 703
Query: 1065 gatacagtattatcaacattatatgttgccaagaaatatatagttcctcatttggcaagg 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gatacagtattatcaacattatatgttgccaagaaatatatagttcctcatttggcaagg 763
Query: 1125 gcgtgtgtgaactatttggaaactagtctg 1154
||||||||||||||||||||||||||||||
Sbjct: 764 gcgtgtgtgaactatttggaaactagtctg 793
>BF01028A2D12
Length = 295
Score = 444 bits (224), Expect = e-124
Identities = 246/251 (98%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 2136 ttttatttattttaaggatctcgattgggttgtatgtatgggagggatgcggaacattta 2195
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tttttttttttttaaggatctcgattgggttgtatgtatgggagggatgcggaacattta 216
Query: 2196 taaaattataaccattcccatgataaattattttttgaatatgaaattcttgtgtacatt 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 taaaattataaccattcccatgataaattattttttgaatatgaaattcttgtgtacatt 156
Query: 2256 gttataaattatagtagataagtacttttaagaatgtgatatgggtgttgttaaaagctc 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gttataaattatagtagataagtacttttaagaatgtgatatgggtgttgttaaaagctc 96
Query: 2316 tctagaaatttgtaggtatagaaacaatcttcataaaaagttc-ttatcatt-aaaaaaa 2373
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 95 tctagaaatttgtaggtatagaaacaatcttcataaaaagttcnntatcattaaaaaaaa 36
Query: 2374 tttaaatagtc 2384
|||||||||||
Sbjct: 35 tttaaatagtc 25
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 353,711
Number of extensions: 8214
Number of successful extensions: 8214
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8212
Number of HSP's successfully gapped: 4
Length of query: 2608
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2591
Effective length of database: 8,119,229
Effective search space: 21036922339
Effective search space used: 21036922339
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)