BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09802 (UTR included)
(4351 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2D05 1417 0.0
>BF01020A2D05
Length = 737
Score = 1417 bits (715), Expect = 0.0
Identities = 724/727 (99%)
Strand = Plus / Plus
Query: 2936 gggtccaaaggaggccgagatagtcctggctatgtcagtgtacaccaacccgtcgttggg 2995
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 11 gggtccaaaggaggccgagatagtcctggctatgtcactgtacaccaacccgtcgttggg 70
Query: 2996 tcacagcgaggtggagctggacaacaccttccagctggaccaggcggtcgacgacctgga 3055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcacagcgaggtggagctggacaacaccttccagctggaccaggcggtcgacgacctgga 130
Query: 3056 actggcgataagactctccactaacattaagaacggagacaccttctacacggacctcaa 3115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 actggcgataagactctccactaacattaagaacggagacaccttctacacggacctcaa 190
Query: 3116 cggcatgcagatgatacggcgacggtacttcgataaacttcccctgcaagcgaacttcta 3175
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cggaatgcagatgatacggcgacggtacttcgataaacttcccctgcaagcgaacttcta 250
Query: 3176 ccctctgccggcggcggcctacatcgaggacgctgcgaccaggctgacagtagtgacgtc 3235
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 251 ccctctgccggcggcggcctacatcgaggacgctgcgaccagactgacagtagtgacgtc 310
Query: 3236 cacaccgctcggcaccgccgccctgcaacccggacagatagagataatgcaggaccgtcg 3295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cacaccgctcggcaccgccgccctgcaacccggacagatagagataatgcaggaccgtcg 370
Query: 3296 gctgagtcgcgacgacaaccgcggcgtgaaccagggcgtcctcgacaacgtgcgcacaag 3355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gctgagtcgcgacgacaaccgcggcgtgaaccagggcgtcctcgacaacgtgcgcacaag 430
Query: 3356 acacgtgttcagggtcatcgtagaacactcgcaacccaactgccagtctacagccgcgga 3415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acacgtgttcagggtcatcgtagaacactcgcaacccaactgccagtctacagccgcgga 490
Query: 3416 ccgtactagcgggcacctgtctctgggcgcggcggtgtctcagcggacgctacagcagcc 3475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ccgtactagcgggcacctgtctctgggcgcggcggtgtctcagcggacgctacagcagcc 550
Query: 3476 cctggtggtgatgcagttcacatccgaggaggttccccccaccgcagcgcccccgcacgg 3535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cctggtggtgatgcagttcacatccgaggaggttccccccaccgcagcgcccccgcacgg 610
Query: 3536 cgccgccgacgtcgaactggcctctatacgaccagctcgagggatgaaggacggctctaa 3595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cgccgccgacgtcgaactggcctctatacgaccagctcgagggatgaaggacggctctaa 670
Query: 3596 actgcaaggtgttggggcgacgttcagacgactacattttgacagctgctatggaaatga 3655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 actgcaaggtgttggggcgacgttcagacgactacattttgacagctgctatggaaatga 730
Query: 3656 catcgtc 3662
|||||||
Sbjct: 731 catcgtc 737
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 423,608
Number of extensions: 8616
Number of successful extensions: 8616
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8616
Number of HSP's successfully gapped: 1
Length of query: 4351
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4333
Effective length of database: 8,109,745
Effective search space: 35139525085
Effective search space used: 35139525085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)