BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09807 (UTR included)
(3187 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2A12 1195 0.0
>BF01032A2A12
Length = 678
Score = 1195 bits (603), Expect = 0.0
Identities = 620/626 (99%)
Strand = Plus / Plus
Query: 384 gttgagtctttaattttagtgtgataataaataaacaaaatggttcaactactttatata 443
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 gttgagtctttaattttagtgtgataataaataaactnaatggttcaactactttatata 60
Query: 444 gttgctagtttacatgtacttttgtgtccattcactaaagtggaagaaagtttcaatatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgctagtttacatgtacttttgtgtccattcactaaagtggaagaaagtttcaatatg 120
Query: 504 caggctatgcatgatattctgtatcatcggtttaacctatcagagtacgatcataatgag 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caggctatgcatgatattctgtatcatcggtttaacctatcagagtacgatcataatgag 180
Query: 564 ttcccgggtgttgtaccgcgaacttttattggaccactcattatttccgcgttatcctca 623
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcccgggtgttgtaccgcgtacttttattggaccactcattatttccgcgttatcctca 240
Query: 624 cctgttgttggtctattacatttattcggtataaataaattttggatgcaatatgtcgtg 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctgttgttggtctattacatttattcggtataaataaattttggatgcaatatgtcgtg 300
Query: 684 agactgactctagcagtggctgtgatagcaacatggtatcaacttcggaattctttgaaa 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agactgactctagcagtggctgtgatagcaacatggtatcaacttcggaattctttgaaa 360
Query: 744 aagctttttggaagtacatttacatggtggttcacattgataagtgtctctcaataccat 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagctttttggaagtacatttacatggtggttcacattgataagtgtctctcaataccat 420
Query: 804 ttcatgttttatatgagccgtccattacccaatattatggtattgccatttgtactcttg 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcatgttttatatgagccgtccattacccaatattatggtattgccatttgtactcttg 480
Query: 864 gctttggaaggatggttgcttggaaaaaacaaacagttccttttatcagctggagcagct 923
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 gctttggaaggatggttgcttggaaaaaataaacagttccttttatcagctggagcagct 540
Query: 924 attgttatatttcgagctgagctagctatgttatttggcttgtaccttatcatagacatc 983
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 541 attgttatatttcgagctgagctagctatgttgtttggcttgtaccttatcatagatatc 600
Query: 984 tacttcaagaagattgatgtcacaac 1009
||||||||||||||||||||||||||
Sbjct: 601 tacttcaagaagattgatgtcacaac 626
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1033 ctggtgtgttcttggtattaatcacagtatcagttgattctttgttctgggg 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctggtgtgttcttggtattaatcacagtatcagttgattctttgttctgggg 678
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 419,336
Number of extensions: 9129
Number of successful extensions: 9129
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9129
Number of HSP's successfully gapped: 2
Length of query: 3187
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3169
Effective length of database: 8,109,745
Effective search space: 25699781905
Effective search space used: 25699781905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)