BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09841 (UTR included)
(1751 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2E01 886 0.0
>BF01020A2E01
Length = 694
Score = 886 bits (447), Expect = 0.0
Identities = 493/506 (97%), Gaps = 3/506 (0%)
Strand = Plus / Plus
Query: 1214 gcgtcgcgtcgccaaacatccaatattcggtgaaactttggccgcgacggttggcactga 1273
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10 gcgtcgcgtcgccaaacatccaatattcggtgaaactttggccgcgacggtcggcactga 69
Query: 1274 tggttcgcactacaagaacgcgtgtttccgccacgccgccgcccacgtcctctccccgcc 1333
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tggctcgcactacaagaacgcgtgtttccgccacgccgccgcccacgtcctctccccgcc 129
Query: 1334 actccgcgaccccagcacaccggaagccatcatcgacgccctcgcacagtcgctgctggt 1393
|||||||||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 130 actccgcgaccccagcacaccggaagccatcatcgacgccctcgcaca--cgacgacc-t 186
Query: 1394 ccaagtgatagccagcgacaactgcaccttcaatgaaaaagataaggaattggggaaaaa 1453
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 187 ccaagtgatagccagcgacaactgcaccttcaatgagaaagataaggaattggggaaaaa 246
Query: 1454 cgacttcaccaagatacctaacggcgtgaacggggtcgaggaccgcatggctatactgtg 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cgacttcaccaagatacctaacggcgtgaacggggtcgaggaccgcatggctatactgtg 306
Query: 1514 gcagaaagcggtcaacactggtgtcatggacccttgtcgtttcgtggccgtgactagtac 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gcagaaagcggtcaacactggtgtcatggacccttgtcgtttcgtggccgtgactagtac 366
Query: 1574 caacgctgcgaatatcttcaacctaccatccaagggccgcgtggcggtgggcgcggacgg 1633
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 caacgctgcgaatatcttcaacctaccgtccaagggccgcgtggcggtgggcgcggacgg 426
Query: 1634 tgacgtcatcgtttgggaccctcgcctcgagaagaccatttccgccgcgacccaccacca 1693
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgacgtcatcgtttgggatcctcgcctcgagaagaccatttccgccgcgacccaccacca 486
Query: 1694 cgccgtagattttaatatatttgagg 1719
||||||||||||||||||||||||||
Sbjct: 487 cgccgtagattttaatatatttgagg 512
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,688
Number of extensions: 3384
Number of successful extensions: 3384
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3384
Number of HSP's successfully gapped: 2
Length of query: 1751
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1734
Effective length of database: 8,119,229
Effective search space: 14078743086
Effective search space used: 14078743086
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)