BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09869 (UTR included)
(4930 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B2G04 1578 0.0
>BF01058B2G04
Length = 827
Score = 1578 bits (796), Expect = 0.0
Identities = 818/827 (98%)
Strand = Plus / Plus
Query: 3565 atcagaattatggttctagtcaaggttttgttcacggttcatggggtactacggaaaccg 3624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcagaattatggttctagtcaaggttttgttcacggttcatggggtactacggaaaccg 60
Query: 3625 ttaatccaaatctaatgaacgccggatccaaaacctatagaaatccaagcgttactgtcg 3684
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 ttaatccaaatctaatgaacgccggatccaaaacctatagaaatccaagcgtcactgtcg 120
Query: 3685 tgggcgatgaagacgaggacaaacttgaaggttttggagcctacgcagcccaaaactcta 3744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggcgatgaagacgaggacaaacttgaaggttttggagcctacgcagcccaaaactcta 180
Query: 3745 ataatgaatttaagtttggtatcgctgacgtgactaaccaggccggctctagtggaggcg 3804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataatgaatttaagtttggtatcgctgacgtgactaaccaggccggctctagtggaggcg 240
Query: 3805 gtgcagcatacagatctggttcacaagtctaccagaacggtcaacaaggagctttccagg 3864
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtggagcatacagatctggttcacaagtctaccagaacggtcaacaaggagctttccagg 300
Query: 3865 gcggcgtacaaggaggagcgtcttcttcatacggtaacagtggaagttattcgtactctt 3924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcggcgtacaaggaggagcgtcttcttcatacggtaacagtggaagttattcgtactctt 360
Query: 3925 cctcacaatcaggcggtcacagatcatattcacagtcaggacacagtttcagttcgtcat 3984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctcacaatcaggcggtcacagatcatattcacagtcaggacacagtttcagttcgtcat 420
Query: 3985 cggaacagagacgagaaagtactagaagaaaaagacaagatgaagtcgatacggaactga 4044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggaacagagacgagaaagtactagaagaaaaagacaagatgaagtcgatacggaactga 480
Query: 4045 aggagatgctgtcccgctgcgaagagaagtacaagtgctcagtggtgcggtgtcacacgg 4104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggagatgctgtcccgctgcgaagagaagtacaagtgctcagtggtgcggtgtcacacgg 540
Query: 4105 gccgccttgtgaagggacaggctgtgtgggtcgcgctacggtcgcgaatcaactcctctg 4164
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 541 gccgccttgtgaagggacaggctgtgtgggtcgcgctacggtcgcgaatcaactcctccg 600
Query: 4165 tactcaatgaaatctctcaggaacgctccgtgaaactgtcatcgctgggcgcggctcgcg 4224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tactcaatgaaatctctcaggaacgctccgtgaaactgtcatcgctgggcgcggctcgcg 660
Query: 4225 tgtcccgtctgcctctggtgggtaggcccctggagcgcggctggcggtcggcggaggcgg 4284
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 661 tgtcccgtctgcctctggtgggtaggtccctggagcgcggctggcggtcggcggnnncgg 720
Query: 4285 tgacgactctcacgcctcagctggaagcgcgtgactccggcgccatccccctgtgggtca 4344
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 721 tgacgactctcacgcctcagctggaagcgcgtgactccggcgccatcnccntgtgggtca 780
Query: 4345 tcatactggcagctgtcgtcggcgcgctgctgttgttactgctcatc 4391
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tcatactggcagctgtcgtcggcgcgctgctgttgttactgctcatc 827
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 437,258
Number of extensions: 7873
Number of successful extensions: 7873
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7873
Number of HSP's successfully gapped: 1
Length of query: 4930
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4912
Effective length of database: 8,109,745
Effective search space: 39835067440
Effective search space used: 39835067440
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)