BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09871 (UTR included)
(1555 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2985_C1 1475 0.0
>BF14_2985_C1
Length = 925
Score = 1475 bits (744), Expect = 0.0
Identities = 790/803 (98%), Gaps = 2/803 (0%)
Strand = Plus / Plus
Query: 480 agcttactacagtagtgaaagatgtcggatgatgcagagcaacaggcagaggagattgag 539
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 125 agcttactacagtagtaaaagatgtcggatgatgcagagcaacaggcggaggagattgag 184
Query: 540 gtgctgaaatctatttatgaaggcgatgaaaatttcaagcaagttgattcaaaaacatac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gtgctgaaatctatttatgaaggcgatgaaaatttcaagcaagttgattcaaaaacatac 244
Query: 600 caatacaagtacatagatggagaaaaaacatttatattagagataatatggggaaccaca 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 245 caatacaagtacatagatggagaaaaaacatttatattagagataatatggggacccaca 304
Query: 660 tatcctacggagaaacctagttttaatttagatattttctacaatcaaaatctattacca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tatcctacggagaaacctagttttaatttagatattttctacaatcaaaatctattacca 364
Query: 720 tcggtcaaggagaatatactttcaatagttaatgcggaggcggaccagtgggtcggttgt 779
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 365 tcggtcaaggagaatatactttcaatagttaatgcagaggcggaccagtgggtcggttgt 424
Query: 780 gcgatgacttatactatatttgaaggcctcaaagagaaagttaaagaaattctagaagca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gcgatgacttatactatatttgaaggcctcaaagagaaagttaaagaaattctagaagca 484
Query: 840 caaacagaagaagcagtcatagccagagttgagaagattactatcgcggatcagaatgaa 899
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 485 caaacagaagaagcagtcatagccagagttgagaagattactatcgcagatcagaatgaa 544
Query: 900 tccaagaagccggagaagaaagaacagctgagtaaggcccagaagcggcgtgcatgggac 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tccaagaagccggagaagaaagaacagctgagtaaggcccagaagcggcgtgcatgggac 604
Query: 960 agagctgagatcggtcgagccggagagaaaccccgcggctgggattgggtggacattgtc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agagctgagatcggtcgagccggagagaaaccccgcggctgggattgggtggacattgtc 664
Query: 1020 aaacatctgtcacaggcgccccacacaccctcgtgacaataaatgtcactttgacggttg 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aaacatctgtcacaggcgccccacacaccctcgtgacaataaatgtcactttgacggttg 724
Query: 1080 acatgtcggtcgatagcatttcagaatattgacaatggaattctgtagtcatatgaaata 1139
|||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 725 acatgtcggtcgatagcacttcagaacattgacaatcgaattctgtagtcatatgaaata 784
Query: 1140 aaaaaataataattaaatagattcaacgacagttctctgctttcaatacaaaaaatacag 1199
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 785 aaaaaataataattaaatagatccaacgacagttctctgctttc-atacaaaaaatacag 843
Query: 1200 attataaaatattccgtttttatcatgatccgaaatcggctgtttattttagaacttcct 1259
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 844 attatanaatattccgtttttatcatgatccgaaatcggctgtttatttta-aacttcct 902
Query: 1260 gtattgttatctgtatggctgta 1282
| |||||||||||||||||||||
Sbjct: 903 ggattgttatctgtatggctgta 925
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,330
Number of extensions: 5572
Number of successful extensions: 5572
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5570
Number of HSP's successfully gapped: 1
Length of query: 1555
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1538
Effective length of database: 8,119,229
Effective search space: 12487374202
Effective search space used: 12487374202
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)