BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09893 (UTR included)
(2050 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A1C12 1402 0.0
>BF01047A1C12
Length = 741
Score = 1402 bits (707), Expect = 0.0
Identities = 725/731 (99%)
Strand = Plus / Plus
Query: 395 gctaaaaacgttattcaaatgtttgaattttacatgcaatatcaaaataaaaacgtttag 454
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 11 gctaaaaacgttattcaaatgtttgaatttcatatgcaatatcaaaataaaaacgtttag 70
Query: 455 tatttagtgataaggaaggatactttcataaatattatttataatgatgagtgcacaaaa 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tatttagtgataaggaaggatactttcataaatattatttataatgatgagtgcacaaaa 130
Query: 515 atgtgattgtaaagaaaataggcgtccgactgctggcagatccgcatgcatttgttcttc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgtgattgtaaagaaaataggcgtccgactgctggcagatccgcatgcatttgttcttc 190
Query: 575 tagcggacaaaaaaccgcagctgatagcttcaaagtgccaaccctacctgtaagtcgacc 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tagcggacaaaaaaccgcagctgatagcttcaaagtgccaaccctacctgtaagtcgacc 250
Query: 635 tcttcatactaacaacaaagctagtgataaagaacagaacggtaaacctgaactcaaagt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcttcatactaacaacaaagctagtgataaagaacagaacggtaaacctgaactcaaagt 310
Query: 695 gagagatgataagaaaaagcaatgggcactcactgatttcgacttgggacgtcctctcgg 754
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 311 gagagatgataagaaaaagcaatgggcacttactgatttcgacttgggacgtcctctcgg 370
Query: 755 taaaggaaaatttggaaatgtgtacttagcaagagagaaagaatcgcattacgttgtggc 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taaaggaaaatttggaaatgtgtacttagcaagagagaaagaatcgcattacgttgtggc 430
Query: 815 attaaaggtactattcaaaagtcagattttagagtctgatattgagcatcaagtgagacg 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 attaaaggtactattcaaaagtcagattttagagtctgatattgagcatcaagtgagacg 490
Query: 875 tgaagtcgaaatacagtgtagactgagacatcccaatattttgcgcatgtacggatattt 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgaagtcgaaatacagtgtagactgagacatcccaatattttgcgcatgtacggatattt 550
Query: 935 tcacgatgaaaaacgtatatatttaattctggaattcgccaaacacggtgctctgtataa 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tcacgatgaaaaacgtatatatttaattctggaattcgccaaacacggtgctctgtataa 610
Query: 995 gttgttgaaggaacgcgggcgttttgatgaaaagacagcagctatatacgtgcgggatct 1054
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 611 attgttgaaggaacgcgggcgttttgatgaaaaaacagcagctatatacgtgcgggatct 670
Query: 1055 aacaaaggcgttaatctattgtcattccaaaaaagttattcatcgcgatattaaacctga 1114
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 671 aacaaaggcgttaatctattgtcattccaaaaaagttattcatcgcgatattaagcctga 730
Query: 1115 aaatttattga 1125
|||||||||||
Sbjct: 731 aaatttattga 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 306,206
Number of extensions: 6900
Number of successful extensions: 6900
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6900
Number of HSP's successfully gapped: 1
Length of query: 2050
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2033
Effective length of database: 8,119,229
Effective search space: 16506392557
Effective search space used: 16506392557
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)