BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09899 (UTR included)
(2500 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 94 1e-18
BF01049B1F01 86 3e-16
BF14_335_C4 78 8e-14
>BF01019A1H08
Length = 504
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 235 agccccttaagcctacacctgggtcgtatgtcccaggcactattaaagctcctctccctg 294
|||||||||| ||||||||||||||| | ||||||||||| || |||||||||||||||
Sbjct: 483 agccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctg 424
Query: 295 caacgccatggaccc 309
|||||| ||||||||
Sbjct: 423 caacgcgatggaccc 409
>BF01049B1F01
Length = 840
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 236 gccccttaagcctacacctgggtcgtatgtcccaggcactattaaagctcctctccctgc 295
|||||||| ||||||||||||||| | |||||||||||| || ||||||||||||||||
Sbjct: 650 gccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgc 591
Query: 296 aacgccatgga 306
|||| ||||||
Sbjct: 590 aacgacatgga 580
>BF14_335_C4
Length = 1491
Score = 77.8 bits (39), Expect = 8e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 236 gccccttaagcctacacctgggtcgtatgtcccaggcactattaaagctcctctccctgc 295
||||||||| ||||||||||||||| | |||||||||||| || |||||||||| |||||
Sbjct: 1247 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgc 1305
Query: 296 aacgccatggacccc 310
||||| |||| ||||
Sbjct: 1306 aacgcgatggtcccc 1320
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,568
Number of extensions: 4982
Number of successful extensions: 4982
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4982
Number of HSP's successfully gapped: 3
Length of query: 2500
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2483
Effective length of database: 8,119,229
Effective search space: 20160045607
Effective search space used: 20160045607
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)