BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09901 (UTR included)
(2191 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B2E03 1536 0.0
BF01060A2B04 385 e-106
>BF01041B2E03
Length = 783
Score = 1536 bits (775), Expect = 0.0
Identities = 781/783 (99%)
Strand = Plus / Plus
Query: 323 ctatggtgtcaaaatatttttgttttgtttatcgtatttttcttttttaaaagtgaaata 382
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ctatggtgtcaaaatatttttgttttgtttatcctatttttcttttttaaaagtgaaata 60
Query: 383 tgtgataattgtggtatatttttaatgtttattttattaattttattaggtgaatgtatt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgataattgtggtatatttttaatgtttattttattaattttattaggtgaatgtatt 120
Query: 443 aatttcattttgtggtcatgtcatataagcagattcttctcaagttgttgtgatagtcat 502
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 aatttcattttgtggtcatgtcatgtaagcagattcttctcaagttgttgtgatagtcat 180
Query: 503 gtcagactgtgcgctggtaaccagtgtaagcgaacacgatgctagtatggatgtgggaaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcagactgtgcgctggtaaccagtgtaagcgaacacgatgctagtatggatgtgggaaa 240
Query: 563 cgacaaatccctcttcgagccgactattgatatgatggtaaatgatttcgacgacgagag 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgacaaatccctcttcgagccgactattgatatgatggtaaatgatttcgacgacgagag 300
Query: 623 aacattagacgaagaagaagctttggcggcaggcgagcaacaagatccgaaagcggaact 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacattagacgaagaagaagctttggcggcaggcgagcaacaagatccgaaagcggaact 360
Query: 683 taatagcttgcaacgtgaaggtgatatgcctttagaggaattacttgcattgtatggtta 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taatagcttgcaacgtgaaggtgatatgcctttagaggaattacttgcattgtatggtta 420
Query: 743 taacagaggtatggataaagcaagccctgaacaaccaccagaggtggtaccggaagaaaa 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taacagaggtatggataaagcaagccctgaacaaccaccagaggtggtaccggaagaaaa 480
Query: 803 tgagaaagctgagtctgctctacagcagttatacactgagaccacaagccctgaagccac 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgagaaagctgagtctgctctacagcagttatacactgagaccacaagccctgaagccac 540
Query: 863 acggtgtctccgctctggctcaaggcctccttctgaagaagaagatgattatgactatag 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acggtgtctccgctctggctcaaggcctccttctgaagaagaagatgattatgactatag 600
Query: 923 tcccgatgaggatgactggaaaaaaactatcatggtaggtagtgattatcaagctggtat 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcccgatgaggatgactggaaaaaaactatcatggtaggtagtgattatcaagctggtat 660
Query: 983 accagaaggtctctgcagttatgatgatgctttgccatatgagaatgaagataaattgtt 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accagaaggtctctgcagttatgatgatgctttgccatatgagaatgaagataaattgtt 720
Query: 1043 gtggaacccaagtgtccttgatgaaaaggtgatagaagattatatgagaaaaatatgtgc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtggaacccaagtgtccttgatgaaaaggtgatagaagattatatgagaaaaatatgtgc 780
Query: 1103 tat 1105
|||
Sbjct: 781 tat 783
>BF01060A2B04
Length = 218
Score = 385 bits (194), Expect = e-106
Identities = 200/202 (99%)
Strand = Plus / Plus
Query: 1837 atttttattattattatttttttaatatatgactgaagaaatagcatcactaagatttaa 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttttattattattatttttttaatatatgactgaagaaatagcatcactaagatttaa 60
Query: 1897 tacatattcggcaaactaatcgcattagtgttttagaattttcaattttaatcctaagtt 1956
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tacatattcggcaaactaatcgcattagttttttagaattttcaattttaatcctaagtt 120
Query: 1957 tgtcagtgcctatatcaatacaacacagtatttttaataaatatagttgatttttacttt 2016
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 tgtcagtgcctatatcaatacaacacagtatttttcataaatatagttgatttttacttt 180
Query: 2017 tttattctgtgaccataagtaa 2038
||||||||||||||||||||||
Sbjct: 181 tttattctgtgaccataagtaa 202
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,648
Number of extensions: 9042
Number of successful extensions: 9042
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9040
Number of HSP's successfully gapped: 2
Length of query: 2191
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2174
Effective length of database: 8,119,229
Effective search space: 17651203846
Effective search space used: 17651203846
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)