BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09902 (UTR included)
(2635 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2D02 1457 0.0
>BF01054A2D02
Length = 774
Score = 1457 bits (735), Expect = 0.0
Identities = 766/775 (98%), Gaps = 1/775 (0%)
Strand = Plus / Plus
Query: 210 ttgaaatctaaaattaaatgtatatgcattatttctttttataaacttgatttatttaaa 269
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1 ttgaaatctataattaaatgtatatgcactatttctttttataaacttgatttacttaaa 60
Query: 270 ggcttttataggaaaaagcttattaacgtgtgaaacatacaataaataaattatattgat 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcttttataggaaaaagcttattaacgtgtgaaacatacaataaataaattatattgat 120
Query: 330 aataaaaaaacaggtatgatattaactgctgatatgtctgacaaggaaattataaacgat 389
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aataaaaaa-cagatatgatattaactgctgatatgtctgacaaggaaattataaacgat 179
Query: 390 tttaaagaaaattacgctaaagtccgaaagttgttagacgaagatagtaagaacgacccc 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tttaaagaaaattacgctaaagtccgaaagttgttagacgaagatagtaagaacgacccc 239
Query: 450 gagaacgagccctatttatcaaaatacaaagctaaagaaatcctaaacaatatgcgtgag 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gagaacgagccctatttatcaaaatacaaagctaaagaaatcctaaacaatatgcgtgag 299
Query: 510 gcgttaagccgaatttcaaattcgaatacaagtttggataaaataaaactagattctatg 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gcgttaagccgaatttcaaattcgaatacaagtttggataaaataaaactagattctatg 359
Query: 570 ttaggggcagttttactgaacatgggtgttattgacatggaaacagaggagcttacatca 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttaggggcagttttactgaacatgggtgttattgacatggaaacagaggagcttacatca 419
Query: 630 agtgagaccattttaagggaagctgaggatcttctcacacctaactcctgtaaaccagaa 689
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agtgagaccattctaagggaagctgaggatcttctcacacctaactcctgtaaaccagaa 479
Query: 690 attgtcatcaccttaattaacattgaaaacaatcttggtatcctttggtctaatagagat 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 attgtcatcaccttaattaacattgaaaacaatcttggtatcctttggtctaatagagat 539
Query: 750 gaaccaggtaaagctaaaacgtttttactcaaagcaaaatcgctttatgaagattttaaa 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaaccaggtaaagctaaaacgtttttactcaaagcaaaatcgctttatgaagattttaaa 599
Query: 810 tgtacattacaaatgccattgccaattgaatcaattataagcaacacctgtgaaattgcc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tgtacattacaaatgccattgccaattgaatcaattataagcaacacctgtgaaattgcc 659
Query: 870 gctggtgatttcatgatcttggaaaaagcttataccttgacactctattatatggcacaa 929
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 660 gctggtgatttcatgatcttggaaaaagcttataccttgacactctactatatggcacaa 719
Query: 930 atctatggttcgctaaaggaaaacttaaagtctgctatttactgtcacgtgactt 984
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 atttatggttctctaaaggaaaacttaaagtctgctatttactgtcacgtgactt 774
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 353,829
Number of extensions: 7904
Number of successful extensions: 7904
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7901
Number of HSP's successfully gapped: 1
Length of query: 2635
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2618
Effective length of database: 8,119,229
Effective search space: 21256141522
Effective search space used: 21256141522
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)