BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09919 (UTR included)
(5490 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_268_C1 2210 0.0
>BF14_268_C1
Length = 2327
Score = 2210 bits (1115), Expect = 0.0
Identities = 1144/1153 (99%), Gaps = 3/1153 (0%)
Strand = Plus / Plus
Query: 4341 cgcagtgcgcgtcgcgagcgcccgcgcgtaggccgagaaaggggaaaaaagataagaaca 4400
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1 cgcagtgcgcgtcgcgagcgcccgcgcgtagaccgaggaaggggaaaaaagataagaaca 60
Query: 4401 aagattcagatctagacggagccatggtgccgagtcccgcggcctcacacgcctcgacgt 4460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagattcagatctagacggagccatggtgccgagtcccgcggcctcacacgcctcgacgt 120
Query: 4461 cgactacggccgaggagggcgttctgccggcacccgagccggagagagatgacgccgaca 4520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgactacggccgaggagggcgttctgccggcacccgagccggagagagatgacgccgaca 180
Query: 4521 ccgacggacttacacataacgtttcagttgacacctgcgatgagagccacgcttcaggta 4580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgacggacttacacataacgtttcagttgacacctgcgatgagagccacgcttcaggta 240
Query: 4581 acggagctctactcaatgacaccaattccgaagaccacgaatcggaaaacctaccgcttc 4640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acggagctctactcaatgacaccaattccgaagaccacgaatcggaaaacctaccgcttc 300
Query: 4641 tatcccgtgccaagaaagagaaaaacagtgccaaaaaacaactcaaggatatgcaattct 4700
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 tatcccgtgccaagaaagagaaaaacagtgccaaaaaacaacacaaggatatgcaattct 360
Query: 4701 gcaagaatcttctgtgtgagatggaatgccacgagcacgcttggccgttcctggtgccgg 4760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaagaatcttctgtgtgagatggaatgccacgagcacgcttggccgttcctggtgccgg 420
Query: 4761 tgaacactaaacagttcccgcagtacaggaaagttatcaagtctccgatggacctgtcaa 4820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaacactaaacagttcccgcagtacaggaaagttatcaagtctccgatggacctgtcaa 480
Query: 4821 ccatcaagaggaaactccacgagtccggctacaaatgcaaggaggagtttgcttccgacg 4880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccatcaagaggaaactccacgagtccggctacaaatgcaaggaggagtttgcttccgacg 540
Query: 4881 tccgtctgatattcagtaactgcgaggtgttcaacgaggacgagagtcccgtgggccgag 4940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccgtctgatattcagtaactgcgaggtgttcaacgaggacgagagtcccgtgggccgag 600
Query: 4941 cgggacactgtatgagggagttcttcgagaggagatgggaacacgcatagacgccgtggc 5000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgggacactgtatgagggagttcttcgagaggagatgggaacacgcatagacgccgtggc 660
Query: 5001 cgtgaacaggagggtcgatgaccgtgaacgctagtcgatgaccgtgaaactcgagtcatc 5060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgtgaacaggagggtcgatgaccgtgaacgctagtcgatgaccgtgaaactcgagtcatc 720
Query: 5061 agtcgtgaacagcgctgccatcgaccgtgaacgactcgtgtgtcgtgtaaatattaatga 5120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agtcgtgaacagcgctgccatcgaccgtgaacgactcgtgtgtcgtgtaaatattaatga 780
Query: 5121 tatagcctcgtcagtcggagcggaa---gtcgtcgtgatcatatccgcaccggtggcgtg 5177
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 781 tatagcctcgtcagtcggagcggaagtcgtcgtcgtgatcatatccgtaccggtggcgtg 840
Query: 5178 agatatatattattgtcaaattttaactgtatctatctctgcctagtaaccgatgtgaca 5237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agatatatattattgtcaaattttaactgtatctatctctgcctagtaaccgatgtgaca 900
Query: 5238 aaatattttttcatataattttctatcgttaataacctagtgttagtggaccgttatgta 5297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaatattttttcatataattttctatcgttaataacctagtgttagtggaccgttatgta 960
Query: 5298 cgtcactgccaaaacacgcgtgtgtcgcgactcactcaacattatttattgtgctctgtg 5357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgtcactgccaaaacacgcgtgtgtcgcgactcactcaacattatttattgtgctctgtg 1020
Query: 5358 caagctctcgctgtacagacgatatgttttaatgtaatctatggtctaggcgctgaacgc 5417
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 1021 caagctctcgctgtacagacgatatgtttcaatgtaacctatggtctaggcgctgaacgc 1080
Query: 5418 gtcggtcgagtttacttcaggcgctggtcgccatgtttgtttttggattatgactttatt 5477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gtcggtcgagtttacttcaggcgctggtcgccatgtttgtttttggattatgactttatt 1140
Query: 5478 tccttgggcacac 5490
|||||||||||||
Sbjct: 1141 tccttgggcacac 1153
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 460,969
Number of extensions: 13433
Number of successful extensions: 13433
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13430
Number of HSP's successfully gapped: 1
Length of query: 5490
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5472
Effective length of database: 8,109,745
Effective search space: 44376524640
Effective search space used: 44376524640
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)