BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09936 (UTR included)
(2926 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1491_C1 418 e-116
BF01024A2F09 258 4e-68
>BF14_1491_C1
Length = 993
Score = 418 bits (211), Expect = e-116
Identities = 221/225 (98%)
Strand = Plus / Minus
Query: 2702 aaaagcaaatattattgtcatactctggggcctcaagaatgacatctattcaaatgtgtt 2761
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 993 aaaagcaaatattattgtcatannctggggcctcaagaatgacatctattcaaatgtgtt 934
Query: 2762 gcttacacaaaaaatataaaccttaatacagataataaatattgcttagcagtcaaatca 2821
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 933 gcttacataaaaaatataaaccttaatacagataataaatatagcttagcagtcaaatca 874
Query: 2822 aaatcactcatatttaattactaacttaatataaacaaggaactgtttcagctaaacata 2881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aaatcactcatatttaattactaacttaatataaacaaggaactgtttcagctaaacata 814
Query: 2882 tacattaggaaacagaacaatatttaaaacactcctgtgatattc 2926
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tacattaggaaacagaacaatatttaaaacactcctgtgatattc 769
>BF01024A2F09
Length = 320
Score = 258 bits (130), Expect = 4e-68
Identities = 137/138 (99%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 2449 tgtccatatttattttatttaaaccaaccatctcaaaggtcatggaatatttatattatc 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tgtccatatttattttatttaaaccaaccatctcaaaggtcatggaatatttatattatc 156
Query: 2509 aaccctcatagcactaagctccagatatagcaaattaattattattaaggatttttttct 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 155 aaccctcatagcactaagctccagatatagcaaattaattattattaaggatt-ttttct 97
Query: 2569 tctgttcatgaagtaggc 2586
||||||||||||||||||
Sbjct: 96 tctgttcatgaagtaggc 79
Score = 163 bits (82), Expect = 2e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 2653 tagttacatataatttcagaaacaatactgaaaacaaaaagaaaaattaaaaagcaaata 2712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagttacatataatttcagaaacaatactgaaaacaaaaagaaaaattaaaaagcaaata 60
Query: 2713 ttattgtcatactctggggcct 2734
||||||||||||||||||||||
Sbjct: 61 ttattgtcatactctggggcct 82
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 461,852
Number of extensions: 10373
Number of successful extensions: 10373
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10372
Number of HSP's successfully gapped: 3
Length of query: 2926
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2908
Effective length of database: 8,109,745
Effective search space: 23583138460
Effective search space used: 23583138460
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)