BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09941 (UTR included)
(1291 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_343_C1 967 0.0
>BF14_343_C1
Length = 543
Score = 967 bits (488), Expect = 0.0
Identities = 510/516 (98%), Gaps = 1/516 (0%)
Strand = Plus / Plus
Query: 491 tgttatcaagatgaaagctgccactttgattgtttttgctgtgatgttggtagcggtatc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttatcaagatgaaagctgccactttgattgtttttgctgtgatgttggtagcggtatc 60
Query: 551 ttgtcggcctgataagcccgacttgaagcaattgaaggcggaagcggcaagaaagaaggc 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtcggcctgataagcccgacttgaagcaattgaaggcggaagcggcaagaaagaaggc 120
Query: 611 ctgtttgcaagattgctcctcggtcaagtacgatcccgtgtgcgccggcaaacccggcga 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtttgcaagattgctcctcggtcaagtacgatcccgtgtgcgccggcaaacccggcga 180
Query: 671 aaaatccaaatcattcggcaacgaatgtgttatgaacaatcacaactgcgagaataatga 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 aaaatccaaatcattcggcaacgaatgtgttatgaacaatcacaactgcgagaacaatga 240
Query: 731 cactctccacaaattgagtaaaggccagtgtgccggatctgactcgatccgtctctctta 790
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 cactctccacaaattgagtaaaggccagtgtgccggatcggactcgatccgtctctctta 300
Query: 791 ataggtattttaataaaaatattccacaaaatactaacatacattattatattgtataat 850
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atacgtattttaaaaaaaatattccacaaaatactaacatacattattatattgtataat 360
Query: 851 taattataacatttattcgttaaaattactgttgatttttttgtacaaat-aaaaaaatt 909
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 361 taattataacatttatacgttaaaattactgttgatttttttgtacaaataaaaaaaatt 420
Query: 910 gtttttaacaaatttaaactgatttaaataaattttaattcatacatattataaatcaaa 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtttttaacaaatttaaactgatttaaataaattttaattcatacatattataaatcaaa 480
Query: 970 atattccattgtctaatataataaatactttaacga 1005
||||||||||||||||||||||||||||||||||||
Sbjct: 481 atattccattgtctaatataataaatactttaacga 516
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 221,322
Number of extensions: 5687
Number of successful extensions: 5687
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5686
Number of HSP's successfully gapped: 1
Length of query: 1291
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1274
Effective length of database: 8,119,229
Effective search space: 10343897746
Effective search space used: 10343897746
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)