BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09951 (UTR included)
(1249 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1H01 904 0.0
>BF01022B1H01
Length = 596
Score = 904 bits (456), Expect = 0.0
Identities = 535/560 (95%), Gaps = 1/560 (0%)
Strand = Plus / Plus
Query: 98 tctaaacatatatgaaaacatatacttttactcgtaaaaacaaataagggtacaagtata 157
|||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 37 tctaaacagatatgaaaatatatttttttactcgtaaaatcaaataagggtacaagtata 96
Query: 158 tttttctgaaacttacatcgtgagttttccgaacactttcctgtgtcgctcggacacgta 217
||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 97 tttttctgaaacttaaatcgtgagttttccgaacaattccctgtgtcgctcggacacgta 156
Query: 218 aacataccaaatgggagcaacgcttaagtaaaa-acaaacaaaattttgcctgcacccag 276
|||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||
Sbjct: 157 aacataccaaatgggagcaacgcttaagtaaagtacgaacaaaattttgcctgcatccag 216
Query: 277 agcggtacgctaggaaataaaaaaatgtctggcgggagatcattaataacaagaccaact 336
||||||| ||| ||||||||||||| | |||||| ||||||||||||||| ||||||||
Sbjct: 217 agcggtaacctatgaaataaaaaaatttttggcggaagatcattaataacaggaccaact 276
Query: 337 aacagataatttcatctcgtttactcgtgatcacggttgctgcagagtaaccgaaaccta 396
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aacagatattttcatctcgtttactcgtgatcacggttgctgcagagtaaccgaaacctc 336
Query: 397 aaaattatggagtgataaaatattaaaaaaaaacgtcgtaatatccgtaaagcttagttt 456
| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 337 aggattatggagtgataaaatatttaaaaaaaacgtcgtaatatccgtaaagcttagttt 396
Query: 457 catttaaacaaatctttccaggtgttcaagagaagctgggtatcatgaatggcggtacgg 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 catttaaacaaatctttccaggtgttcaagagaagctgggtatcatgaatggcggtacgg 456
Query: 517 tctacgcggttttctcatatacagcttgccggccggacgagctgtcgttcgatagcggcg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tctacgcggttttctcatatacagcttgccggccggacgagctgtcgttcgatagcggcg 516
Query: 577 cccggctccaggtgctgaggaaaggagacgacaatgaacgggagtggtggtggtgccgcg 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cccggctccaggtgctgaggaaaggagacgacaatgaacgggagtggtggtggtgccgcg 576
Query: 637 accacacctccgccgagggc 656
|||||||| |||||||||||
Sbjct: 577 accacaccaccgccgagggc 596
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 219,382
Number of extensions: 6162
Number of successful extensions: 6162
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6161
Number of HSP's successfully gapped: 1
Length of query: 1249
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1232
Effective length of database: 8,119,229
Effective search space: 10002890128
Effective search space used: 10002890128
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)