BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN09978 (UTR included)
         (5887 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01059A1F05                                                          579   e-164

>BF01059A1F05
          Length = 831

 Score =   bits (292), Expect = e-164
 Identities = 362/381 (95%), Gaps = 7/381 (1%)
 Strand = Plus / Plus

                                                                        
Query: 5509 gcgtgaaccttaacaatgtgatgtaaaggtttaacaaatgatacttaaatattattcaag 5568
            |||||||||||||||||||||||||||||||||||||| |||||||||||||  |  || 
Sbjct: 1    gcgtgaaccttaacaatgtgatgtaaaggtttaacaaacgatacttaaatat--tcaaat 58

                                                                        
Query: 5569 a-atatatatatatataaatcaggtgctagctacggttatgaaaaatgtatgttgattga 5627
            | ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 59   atatatatatatatatatatcaggtgctagctacagttatgaaaaatttatgttgattga 118

                                                                        
Query: 5628 atacatatatacgatatataaaaattaaaataatattcgttcttctcgtttctagtgctg 5687
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 119  atacatatatacgatataaaaaaattaaaataatattcgttcttctcgtttctagtgctg 178

                                                                        
Query: 5688 tactgtatgggaaaatagcattagttatatgtaagatgattcgttgttactcatatactt 5747
            | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 179  tcctgtatgggaaaatagcattagttatatgtaagataattcgttgttactcatatactt 238

                                                                        
Query: 5748 gtctgctgaagtctc-ccgccgcctccctgctatggtgtgtaccgacatcgccggctctg 5806
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239  gtctgctgaagtctcaccgccgcctccctgctatggtgtgtaccgacatcgccggctctg 298

                                                                        
Query: 5807 cttgcgaaaaagctttcacagaaaaattctgcaatagattataaacgtgatgtgttttta 5866
            |||||||||||||||||||| |||||||||||||||   |||||||||||||| ||||||
Sbjct: 299  cttgcgaaaaagctttcacaaaaaaattctgcaata---tataaacgtgatgtattttta 355

                                 
Query: 5867 tctgtcgtttatttataatct 5887
            |||||||||||||||||||||
Sbjct: 356  tctgtcgtttatttataatct 376


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 530,102
Number of extensions: 13819
Number of successful extensions: 13819
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13811
Number of HSP's successfully gapped: 1
Length of query: 5887
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5869
Effective length of database: 8,109,745
Effective search space: 47596093405
Effective search space used: 47596093405
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)