BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09981 (UTR included)
(1504 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B1D03 979 0.0
>BF01010B1D03
Length = 824
Score = 979 bits (494), Expect = 0.0
Identities = 500/502 (99%)
Strand = Plus / Plus
Query: 520 taccggcgggttgggacagcatgaagaagatcagtatcctgtacgagaacatgcagacgt 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 taccggcgggttgggacagcatgaagaagatcagtatcctgtacgagaacatgcagacgt 114
Query: 580 gccagcccgacgactactacagagacgcgatcgttcaacccgctaccaggaagagcggca 639
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 115 gccagcccgacgactactacagagacgcgatcgtgcaacccgctaccaggaagagcggca 174
Query: 640 ctcgttgtgaggcggaggtgcaggctgaggacgagcaggcattcctccagcggcagttgg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ctcgttgtgaggcggaggtgcaggctgaggacgagcaggcattcctccagcggcagttgg 234
Query: 700 cggcgctgcaggccggcgctcccgcccccagggctgactccccgctcaggaccgcgcaga 759
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cggcgctgcaggccggcgcccccgcccccagggctgactccccgctcaggaccgcgcaga 294
Query: 760 gggtcacgccacagttggacggcgccaagatcggcatgggcaccggcactccgggcaacg 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gggtcacgccacagttggacggcgccaagatcggcatgggcaccggcactccgggcaacg 354
Query: 820 agggcgtcctggccaacttcttcaactcgctgttatacaagaagacggggtcgccggggg 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agggcgtcctggccaacttcttcaactcgctgttatacaagaagacggggtcgccggggg 414
Query: 880 cgcgcgccccggacgcctcgcccgcagccgccgccgcccgctcggacgccgcggcagagc 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cgcgcgccccggacgcctcgcccgcagccgccgccgcccgctcggacgccgcggcagagc 474
Query: 940 tcgacagactcacgcgcgccaagagacctccgccgcccatagacctcaactcctccgact 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcgacagactcacgcgcgccaagagacctccgccgcccatagacctcaactcctccgact 534
Query: 1000 gctagcgggataaacgagaagg 1021
||||||||||||||||||||||
Sbjct: 535 gctagcgggataaacgagaagg 556
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 167,766
Number of extensions: 4024
Number of successful extensions: 4024
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4024
Number of HSP's successfully gapped: 1
Length of query: 1504
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1487
Effective length of database: 8,119,229
Effective search space: 12073293523
Effective search space used: 12073293523
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)