BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN09994 (UTR included)
(1423 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1F05 74 7e-13
BF01020B1C01 74 7e-13
BF01040A1G09 72 3e-12
BF01060A1A06 70 1e-11
BF01051B2F02 68 4e-11
BF01010B1B03 68 4e-11
>BF01033A1F05
Length = 770
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1317 taaatatatatatatatatatatgtatgtatgtatgtatatatatgtgtatgtatgtata 1376
||||||||||||||||||||||| ||||||| ||| ||||||||| | ||| ||| ||||
Sbjct: 479 taaatatatatatatatatatatatatgtatatatatatatatatatatatatatatata 538
Query: 1377 tatat 1381
|||||
Sbjct: 539 tatat 543
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1320 atatatatatatatatatatgtatgtatgtatgtatatatatgtgtatgtatgtatatat 1379
|||||||||||||||||||||||| ||| ||| ||||||||| | ||| ||| |||||||
Sbjct: 486 atatatatatatatatatatgtatatatatatatatatatatatatatatatatatatat 545
Query: 1380 at 1381
||
Sbjct: 546 at 547
>BF01020B1C01
Length = 602
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 1313 aatataaatatatatatatatatatatgtatgtatgtatgtatatatat 1361
|||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 554 aatatatatatatatatatatatatatgtatatatatatgtatatatat 602
>BF01040A1G09
Length = 753
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1318 aaatatatatatatatatatatgtatgtatgtatgtatatatatgtgtatgtatgtatat 1377
|||||||||||||||||||||||||| ||| ||| ||||||||| | ||| ||| |||||
Sbjct: 575 aaatatatatatatatatatatgtatatatatatatatatatatatatatatatatatat 634
Query: 1378 atat 1381
||||
Sbjct: 635 atat 638
>BF01060A1A06
Length = 737
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 1314 atataaatatatatatatatatatatgtatgtatgtatgtatatatatgtgtatgtatgt 1373
||||| |||||||||||||||||||| ||| ||| ||| ||||||||| | ||| ||| |
Sbjct: 636 atatatatatatatatatatatatatatatatatatatatatatatatatatatatatat 695
Query: 1374 atatatattat 1384
|||||||||||
Sbjct: 696 atatatattat 706
>BF01051B2F02
Length = 703
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1312 aaatataaatatatatatatatatatatgtatgtatgtatgtatatatatgtgtatgtat 1371
||||||| |||||||||||||||||||| ||| ||| ||| ||||||||| | ||| |||
Sbjct: 587 aaatatatatatatatatatatatatatatatatatatatatatatatatatatatatat 646
Query: 1372 gtatatatat 1381
|||||||||
Sbjct: 647 atatatatat 656
>BF01010B1B03
Length = 305
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1314 atataaatatatatatatatatatatgtatgtatgtatgtatatatatgtgtatgtatgt 1373
||||| |||||||||||||||||||| ||| ||| ||| ||||||||| | ||| ||| |
Sbjct: 196 atatatatatatatatatatatatatatatatatatatatatatatatatatatatatat 137
Query: 1374 atatatatta 1383
||||||||||
Sbjct: 136 atatatatta 127
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,493
Number of extensions: 13359
Number of successful extensions: 13359
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 13276
Number of HSP's successfully gapped: 7
Length of query: 1423
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1406
Effective length of database: 8,119,229
Effective search space: 11415635974
Effective search space used: 11415635974
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)