BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10001 (UTR included)
(1945 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B1E06 967 0.0
BF01033A1F05 74 9e-13
BF01020B1C01 74 9e-13
BF01040A1G09 72 4e-12
BF01060A1A06 70 1e-11
BF01051B2F02 68 6e-11
BF01010B1B03 68 6e-11
>BF01050B1E06
Length = 758
Score = 967 bits (488), Expect = 0.0
Identities = 503/509 (98%)
Strand = Plus / Plus
Query: 860 gtcggcatcgggtacaattataacggagacgctagcttcatcgtgtccaaccgtcgtagt 919
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtcggcatcaggtacaattataacggagacgctnnnttcatcgtgtccaaccgtcgtagt 60
Query: 920 ttatgtcatggacacagtcaggagtgtttcccccgtcacatttatgtctaacatgctgta 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatgtcatggacacagtcaggagtgtttcccccgtcacatttatgtctaacatgctgta 120
Query: 980 tgcttgttccatattatataaaactagattaccattcatcgttgtcatgaataagacaga 1039
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 tgcttgttccatattatataaaactagattaccgttcatcgttgtcatgaataagacaga 180
Query: 1040 tgtagtaaataacagctatgctgtggaatggatgcgtgatttcgaagcattccaggaatc 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtagtaaataacagctatgctgtggaatggatgcgtgatttcgaagcattccaggaatc 240
Query: 1100 tctagatgccgagggtgatggtgaaggaaactcatatgtagggaacttgactcgttccat 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctagatgccgagggtgatggtgaaggaaactcatatgtagggaacttgactcgttccat 300
Query: 1160 ggcactagccttggattcgttctacaccgaccttagatgttgcggcgtcagtgctcatac 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcactagccttggattcgttctacaccgaccttagatgttgcggcgtcagtgctcatac 360
Query: 1220 cggagagggaatagatgaatttttcaaattagtcgatgaggctgccgaagaatatgaaaa 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggagagggaatagatgaatttttcaaattagtcgatgaggctgccgaagaatatgaaaa 420
Query: 1280 agattataaagctgattggttgaaaatgagacaagaaaaattggacgagcaaaggaagag 1339
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 agattataaagctgattggttgaaaatgagacaagaaaaattggaagagcaaaggaagag 480
Query: 1340 agaggaggaactaaaaaagcctatcaaaa 1368
|||||||||||||||||||||||||||||
Sbjct: 481 agaggaggaactaaaaaagcctatcaaaa 509
Score = 186 bits (94), Expect = 9e-47
Identities = 107/111 (96%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 1369 atgacaagcccgaggatgtcgctgagtttcaggaatttataaggaatcacgttaagacga 1428
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 648 atgacaagcccgaggatgtcgctgnnnttcaggaatttataaggaatcacgttaagacga 707
Query: 1429 ataataataaaacgtag-aaaaaaatatatacactttattatttgattgtc 1478
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 708 ataataataaaacgtagaaaaaaaatatatacactttattatttgattgtc 758
>BF01033A1F05
Length = 770
Score = 73.8 bits (37), Expect = 9e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1617 atatatatacatacatacacatatatatacatacatacatacatatatatatatatatat 1676
||||||||| ||| ||| | ||||||||| ||| ||||||| ||||||||||||||||||
Sbjct: 543 atatatatatatatatatatatatatatatatatatacatatatatatatatatatatat 484
Query: 1677 attta 1681
|||||
Sbjct: 483 attta 479
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1617 atatatatacatacatacacatatatatacatacatacatacatatatatatatatatat 1676
||||||||| ||| ||| | ||||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 547 atatatatatatatatatatatatatatatatatatatatacatatatatatatatatat 488
Query: 1677 at 1678
||
Sbjct: 487 at 486
>BF01020B1C01
Length = 602
Score = 73.8 bits (37), Expect = 9e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 1637 atatatatacatacatacatacatatatatatatatatatatttatatt 1685
||||||||||||| ||| |||||||||||||||||||||||| ||||||
Sbjct: 602 atatatatacatatatatatacatatatatatatatatatatatatatt 554
>BF01040A1G09
Length = 753
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 1617 atatatatacatacatacacatatatatacatacatacatacatatatatatatatatat 1676
||||||||| ||| ||| | ||||||||| ||| ||| ||||||||||||||||||||||
Sbjct: 638 atatatatatatatatatatatatatatatatatatatatacatatatatatatatatat 579
Query: 1677 attt 1680
||||
Sbjct: 578 attt 575
>BF01060A1A06
Length = 737
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 1614 ataatatatatacatacatacacatatatatacatacatacatacatatatatatatata 1673
|||||||||||| ||| ||| | ||||||||| ||| ||| ||| |||||||||||||||
Sbjct: 706 ataatatatatatatatatatatatatatatatatatatatatatatatatatatatata 647
Query: 1674 tatatttatat 1684
||||| |||||
Sbjct: 646 tatatatatat 636
>BF01051B2F02
Length = 703
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1617 atatatatacatacatacacatatatatacatacatacatacatatatatatatatatat 1676
||||||||| ||| ||| | ||||||||| ||| ||| ||| ||||||||||||||||||
Sbjct: 656 atatatatatatatatatatatatatatatatatatatatatatatatatatatatatat 597
Query: 1677 atttatattt 1686
|| |||||||
Sbjct: 596 atatatattt 587
>BF01010B1B03
Length = 305
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1615 taatatatatacatacatacacatatatatacatacatacatacatatatatatatatat 1674
||||||||||| ||| ||| | ||||||||| ||| ||| ||| ||||||||||||||||
Sbjct: 127 taatatatatatatatatatatatatatatatatatatatatatatatatatatatatat 186
Query: 1675 atatttatat 1684
|||| |||||
Sbjct: 187 atatatatat 196
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 385,500
Number of extensions: 18098
Number of successful extensions: 18098
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 18014
Number of HSP's successfully gapped: 9
Length of query: 1945
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1928
Effective length of database: 8,119,229
Effective search space: 15653873512
Effective search space used: 15653873512
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)