BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10026 (UTR included)
(1198 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2D10 1181 0.0
>BF01014B2D10
Length = 660
Score = 1181 bits (596), Expect = 0.0
Identities = 599/600 (99%)
Strand = Plus / Plus
Query: 500 tatgtctgaagctttctttgatgagtatgattattataacttcgaatacgacaagcacat 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 tatgtctgaagctttctttgatgagtatgattattataacttcgaatacgacaagcacat 96
Query: 560 tttctccagtcacagtggcaagcagcggacaaagaaggaggtgagtcagcacacaaatca 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tttctccagtcacagtggcaagcagcggacaaagaaggaggtgagtcagcacacaaatca 156
Query: 620 cttcgatccgtctggccattctagaaagatcgttacgaagttggttaatactgagcacaa 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 cttcgatccgtctggccattctagaaagatcgttacgaagttggttaatactgagcacaa 216
Query: 680 taagaaaggcggcaagtaagaactaatgagttgtagaaataaaaacgactatggcttgta 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 taagaaaggcggcaagtaagaactaatgagttgtagaaataaaaacgactatggcttgta 276
Query: 740 aaagggacgttgatttaatgccgaacgatttgaggacgttatggcggatacccgaagaaa 799
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaaggaacgttgatttaatgccgaacgatttgaggacgttatggcggatacccgaagaaa 336
Query: 800 gaacgggtcgctcgtctctgagatcagtggaacagcccagaaagtttctgttgaaccatt 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaacgggtcgctcgtctctgagatcagtggaacagcccagaaagtttctgttgaaccatt 396
Query: 860 gtttttattatgcacactacaacggaaggtgtcgtcggagcgattcacttcgtagccccg 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtttttattatgcacactacaacggaaggtgtcgtcggagcgattcacttcgtagccccg 456
Query: 920 tcgggatacaccggtgatgtacatcaaacaccgttccgtatactgatctctatctctggg 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcgggatacaccggtgatgtacatcaaacaccgttccgtatactgatctctatctctggg 516
Query: 980 cttgttgtaaagctcatttttgctgtgttactaatttctagttagatattacgttattgt 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cttgttgtaaagctcatttttgctgtgttactaatttctagttagatattacgttattgt 576
Query: 1040 atcgttacgtgctgcgtcgatgactgtaattaatttaaggttaataaaaaactatttaat 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 atcgttacgtgctgcgtcgatgactgtaattaatttaaggttaataaaaaactatttaat 636
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 176,854
Number of extensions: 4970
Number of successful extensions: 4970
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4970
Number of HSP's successfully gapped: 1
Length of query: 1198
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1181
Effective length of database: 8,119,229
Effective search space: 9588809449
Effective search space used: 9588809449
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)