BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10037 (UTR included)
(2479 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 272 3e-72
BF01056B1D02 176 1e-43
BF01052B1H02 151 6e-36
BF01010B2F09 131 6e-30
BF01029B2F12 127 9e-29
BF01037B1H08 123 1e-27
BF01062A1A05 78 8e-14
BF01031B1E12 70 2e-11
>BF01023A2A12
Length = 723
Score = 272 bits (137), Expect = 3e-72
Identities = 222/251 (88%), Gaps = 7/251 (2%)
Strand = Plus / Minus
Query: 2108 atcatcatcatcatcagcctatcacttattagagcccactgctgagcagaggcctcttct 2167
||||||||||||||||||||||| |||| |||||||||||| ||||||||| |
Sbjct: 348 atcatcatcatcatcagcctatcg-------gagctcactgctgagcaaaggcctcttat 296
Query: 2168 gatatggagagggatagagcattaatcaccacgctcgctcaaagctgattggcgatttca 2227
| ||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 295 cacatggagaaggttagagcattaatcaccacgctcgctcaaggctgattggtgatttca 236
Query: 2228 aacttttagtttgaaattataattccagctttcttcacgacgttctccttcaccgtccgt 2287
||||| || ||||||||||||| |||| |||| ||||||||||||||||||||||||||
Sbjct: 235 aacttataatttgaaattataagaccaggtttcctcacgacgttctccttcaccgtccgt 176
Query: 2288 cagtggtgtctaaatactcttagaaagtgcatatgactcggaataaatcacattggtgct 2347
|||||||||||||||||| ||||||||| ||| |||||||||| | ||||||||||| ||
Sbjct: 175 cagtggtgtctaaatactgttagaaagtacatgtgactcggaaaagatcacattggtact 116
Query: 2348 tgccaggtttc 2358
|||||||||||
Sbjct: 115 tgccaggtttc 105
>BF01056B1D02
Length = 778
Score = 176 bits (89), Expect = 1e-43
Identities = 188/220 (85%), Gaps = 7/220 (3%)
Strand = Plus / Minus
Query: 2139 gagcccactgctgagcagaggcctcttctgatatggagagggatagagcattaatcacca 2198
||||||||||||||||| ||||||||||| | ||| || | ||||||||||| |||||
Sbjct: 722 gagcccactgctgagcaaaggcctcttctcacatgaag---gttagagcattaaccacca 666
Query: 2199 cgctcgctcaaagctgattggcgatttcaaacttttagtttgaaattataattccagctt 2258
|||| |||||| | | ||||||||||||| ||| || ||||||||||||| |||| ||
Sbjct: 665 cgcttgctcaagacgggttggcgatttcaatcttataatttgaaattataagaccaggtt 606
Query: 2259 tcttcacgacgttctccttcaccgtccgtcagtggtgtctaaatactcttagaaagtgca 2318
|| |||||||||| |||||||||||| |||||||||||| ||| |||||||||| ||
Sbjct: 605 tcctcacgacgttttccttcaccgtc----agtggtgtctaactacccttagaaagtaca 550
Query: 2319 tatgactcggaataaatcacattggtgcttgccaggtttc 2358
|||||||||||| | ||||||||||| |||||||||||||
Sbjct: 549 tatgactcggaaaagatcacattggtacttgccaggtttc 510
>BF01052B1H02
Length = 790
Score = 151 bits (76), Expect = 6e-36
Identities = 217/263 (82%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 2138 agagcccactgctgagcagaggcctcttctgatatggagagggatagagcattaatcacc 2197
||||||||||| |||||| | |||| |||| ||||||| | ||||||||||| ||||
Sbjct: 286 agagcccactgttgagcaaacgccttttctcccatggagaaagttagagcattaagcacc 345
Query: 2198 acgctcgctcaaagctgattggcgatttcaaacttttagtttgaaattataattccagct 2257
||||| |||||| | | |||||||||||||||| | ||| ||||||||| |||| |
Sbjct: 346 acgcttgctcaagacgggttggcgatttcaaactaattatttcaaattataagaccaggt 405
Query: 2258 ttcttcacgacgttctccttcaccgtccgtcagtggtgtctaaatactcttagaaagtgc 2317
||| |||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 406 ttcctcacgatgttttccttcaccgtccgtcagtagtgtctaaatactcttaaaaagtgc 465
Query: 2318 atatgactcggaataa--atcacattggtgcttgccaggtttcgaagccgcaccctcgtg 2375
|||| | ||| || || |||||||| || ||| ||||| |||||| | |||||||| ||
Sbjct: 466 atatcattcgaaaaaaagatcacattagtacttcccaggattcgaacctgcaccctcatg 525
Query: 2376 cacgagaggcagaccttcaacct 2398
||||||||| | |||| |||||
Sbjct: 526 tacgagaggcgggcctttaacct 548
>BF01010B2F09
Length = 764
Score = 131 bits (66), Expect = 6e-30
Identities = 177/212 (83%), Gaps = 4/212 (1%)
Strand = Plus / Plus
Query: 2155 agaggcctcttctgatatggagagggatagagcattaatcaccacgctcgctcaaagctg 2214
|||||| |||||| | ||||||| || |||||||||||||||||||||||||||| | |
Sbjct: 296 agaggcgtcttctcacatggagaaggttagagcattaatcaccacgctcgctcaagacgg 355
Query: 2215 attggcgatttcaaacttttagtttgaaattataattccagctttcttcacgacgttctc 2274
||||||||||| || || || ||| | ||| || ||||| |||| ||| |||||
Sbjct: 356 attggcgattttaattttataattttta-ttacaaatccaggtttcctcata---ttctc 411
Query: 2275 cttcaccgtccgtcagtggtgtctaaatactcttagaaagtgcatatgactcggaataaa 2334
||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | |
Sbjct: 412 cttcaccgtccgtcagtggcgtctaaatactcttagaaagtacatatgactcgatgaaga 471
Query: 2335 tcacattggtgcttgccaggtttcgaagccgc 2366
|||||||||| |||| ||||||||||| ||||
Sbjct: 472 tcacattggtacttgtcaggtttcgaacccgc 503
>BF01029B2F12
Length = 749
Score = 127 bits (64), Expect = 9e-29
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 2273 tccttcaccgtccgtcagtggtgtctaaatactcttagaaagtgcatatgactcggaata 2332
||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||
Sbjct: 572 tccttcaccgtccgtcagtggtgtctaaatactcttagaaagtacatatgtctc-tcata 630
Query: 2333 aatcacattggtgcttgccaggtttcgaagccgcaccctc 2372
|||||||||||| |||||||||||||||| |||| |||||
Sbjct: 631 aatcacattggtacttgccaggtttcgaacccgcgccctc 670
>BF01037B1H08
Length = 758
Score = 123 bits (62), Expect = 1e-27
Identities = 83/90 (92%)
Strand = Plus / Minus
Query: 2277 tcaccgtccgtcagtggtgtctaaatactcttagaaagtgcatatgactcggaataaatc 2336
||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| | |||
Sbjct: 207 tcaccgtccgtcagtggtgactaaatattcttagaaagtacatatgactcggaaaagatc 148
Query: 2337 acattggtgcttgccaggtttcgaagccgc 2366
|||||||| |||||||||||||||| ||||
Sbjct: 147 acattggtacttgccaggtttcgaacccgc 118
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2139 gagcccactgctgagcagaggcctcttctgatatggagagggatagagcattaatcacca 2198
|||||||| |||||||| ||||||||||| | ||| ||| || ||||||||||| |||||
Sbjct: 328 gagcccacagctgagcaaaggcctcttctcacatgtagaaggttagagcattaagcacca 269
Query: 2199 cgctcgctcaa 2209
|||| ||||||
Sbjct: 268 cgcttgctcaa 258
>BF01062A1A05
Length = 777
Score = 77.8 bits (39), Expect = 8e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 2139 gagcccactgctgagcagaggcctcttctgatatggagagggatagagcattaatcacca 2198
|||||||||||| |||| ||||||||||| | | ||||| || |||||||||||||||||
Sbjct: 585 gagcccactgctaagcaaaggcctcttctcacaaggagaaggttagagcattaatcacca 526
Query: 2199 cgctcgctcaa 2209
|||| ||||||
Sbjct: 525 cgcttgctcaa 515
>BF01031B1E12
Length = 730
Score = 69.9 bits (35), Expect = 2e-11
Identities = 133/163 (81%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 2139 gagcccactgctgagcagaggcctcttctgatatggagagggatagagcattaatcacca 2198
||||||||||||||||| | || ||||| | | ||||| || |||||||||||||||||
Sbjct: 197 gagcccactgctgagcaaatccc-cttctcacacggagaaggttagagcattaatcacca 139
Query: 2199 cgctcgctcaaagctgattggcgatttcaaacttttagtttg-aaattataattccagct 2257
|||| |||||| | | ||||||||||||| ||| || |||| ||| |||| |||| |
Sbjct: 138 cgcttgctcaagacgggttggcgatttcaatcttatactttgctaatcataagaccaggt 79
Query: 2258 ttcttcacgacgttctccttcaccgtccgtcagtggtgtctaa 2300
||| |||||| ||| ||| |||||||| ||||||||| ||||
Sbjct: 78 ttcctcacgatgttttccctcaccgtctctcagtggtgcctaa 36
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 228,206
Number of extensions: 3924
Number of successful extensions: 3924
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 3920
Number of HSP's successfully gapped: 10
Length of query: 2479
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2462
Effective length of database: 8,119,229
Effective search space: 19989541798
Effective search space used: 19989541798
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)