BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10043 (UTR included)
(4300 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 96 6e-19
BF01056B2D01 88 1e-16
BF14_335_C4 80 3e-14
BF01014B2F02 76 5e-13
BF01049B1F01 72 8e-12
>BF01019A1H08
Length = 504
Score = 95.6 bits (48), Expect = 6e-19
Identities = 98/114 (85%), Gaps = 3/114 (2%)
Strand = Plus / Plus
Query: 4190 agcattccatggattcaacatgcgggtgccgggtccat---gatgcagggagaggagctt 4246
||||||| ||||||||| | |||||||||||||||||| | |||||||||||||||||
Sbjct: 379 agcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagctt 438
Query: 4247 caacagggcctgggacttacgacccaagtttaggttcaaagggcgtctatctaa 4300
|||||| |||||||| || ||||||| || |||||| || |||| ||||||||
Sbjct: 439 caacagtgcctgggagttgcgacccaggtgtaggtttaaggggctcctatctaa 492
>BF01056B2D01
Length = 728
Score = 87.7 bits (44), Expect = 1e-16
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 4176 agacgaaatatctcagcattccatggattcaacatgcgggtgccgggtccatga---tgc 4232
|||||||| ||||| ||||||||| ||||| | |||||||||||||||||| | |||
Sbjct: 77 agacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgc 136
Query: 4233 agggagaggagcttcaacagggcctgggac 4262
|||||||||||||||||||| |||||||||
Sbjct: 137 agggagaggagcttcaacagcgcctgggac 166
>BF14_335_C4
Length = 1491
Score = 79.8 bits (40), Expect = 3e-14
Identities = 94/110 (85%), Gaps = 4/110 (3%)
Strand = Plus / Minus
Query: 4176 agacgaaatatctcagcattccatggattcaacatgcgggtgccgggtccat---gatgc 4232
|||||||| ||||||||||||||||||||| | ||||| ||| ||| |||| | |||
Sbjct: 1363 agacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttgc 1304
Query: 4233 agggagaggagcttcaacagggcctgggacttacgacccaagtttaggtt 4282
| |||||||||||||||||| ||||||||||| ||||||| || ||||||
Sbjct: 1303 a-ggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtt 1255
>BF01014B2F02
Length = 623
Score = 75.8 bits (38), Expect = 5e-13
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 4176 agacgaaatatctcagcattccatggattcaacatgcgggtgccgggtccat-gatgcag 4234
|||||||| ||||||||||| ||||| || | ||||||||||||||||| | |||||
Sbjct: 520 agacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtccagcgttgcag 579
Query: 4235 ggagaggagcttcaacagggcctgggacttacgaccca 4272
|||||||||||||| ||| |||| |||||| |||||||
Sbjct: 580 ggagaggagcttcagcagcgcctaggacttgcgaccca 617
>BF01049B1F01
Length = 840
Score = 71.9 bits (36), Expect = 8e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 4230 tgcagggagaggagcttcaacagggcctgggacttacgacccaagtttaggt 4281
||||||||||||||||||||||| ||||||||||| ||||||| || |||||
Sbjct: 590 tgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggt 641
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 472,296
Number of extensions: 8963
Number of successful extensions: 8963
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 8960
Number of HSP's successfully gapped: 5
Length of query: 4300
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4282
Effective length of database: 8,109,745
Effective search space: 34725928090
Effective search space used: 34725928090
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)