BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10059 (UTR included)
(1459 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_155_C1 963 0.0
>BF14_155_C1
Length = 1352
Score = 963 bits (486), Expect = 0.0
Identities = 489/490 (99%)
Strand = Plus / Plus
Query: 436 acagcttgaaaaacaatctccatttgacgacattgaagacgctttcactcgtttcaatca 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 acagcttgaaaaacaatctccatttgacgacattgaagacgctttcactcgtttcaatca 252
Query: 496 gcgtgatgtctcagaagcaaacagtccaagaaatctttcgtacagctgactgcgtgtgct 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcgtgatgtctcagaagcaaacagtccaagaaatctttcgtacagctgactgcgtgtgct 312
Query: 556 tcgatgtggactccaccgttataagggatgaaggtatcgacgaactcgccaacttctgcg 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcgatgtggactccaccgttataagggatgaaggtatcgacgaactcgccaacttctgcg 372
Query: 616 gaaaaggggatgaggttaaaagactaaccgcggaagctatgggcggcaatatgacgtttc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaaaaggggatgaggttaaaagactaaccgcggaagctatgggcggcaatatgacgtttc 432
Query: 676 aagaggcccttaagaagagacttgatattataagacccagtgctagtcaaattaaagaat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aagaggcccttaagaagagacttgatattataagacccagtgctagtcaaattaaagaat 492
Query: 736 tcattgaaacacatcctatacatctcacgcctggaatatctgaattagtgaagacgttac 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcattgaaacacatcctatacatctcacgcctggaatatctgaattagtgaagacgttac 552
Query: 796 acgagagaggtgtagctgtgtatttagtgtcaggaggcttcagatgtcttattgaaccgg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acgagagaggtgtagctgtgtatttagtgtcaggaggcttcagatgtcttattgaaccgg 612
Query: 856 ttgccgagatcttggaaattcccaaagcgaacgtatacgctaatagactcaaattctatt 915
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttgctgagatcttggaaattcccaaagcgaacgtatacgctaatagactcaaattctatt 672
Query: 916 tcaatggtga 925
||||||||||
Sbjct: 673 tcaatggtga 682
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 199,635
Number of extensions: 4292
Number of successful extensions: 4292
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4292
Number of HSP's successfully gapped: 1
Length of query: 1459
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1442
Effective length of database: 8,119,229
Effective search space: 11707928218
Effective search space used: 11707928218
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)