BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10069 (UTR included)
(3691 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3050_C1 1287 0.0
>BF14_3050_C1
Length = 1313
Score = 1287 bits (649), Expect = 0.0
Identities = 679/689 (98%)
Strand = Plus / Plus
Query: 2187 gattcagaggctggaaacagcaaaaaagagaaaaaatcgaaaaagaagactaaaaataaa 2246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gattcagaggctggaaacagcaaaaaagagaaaaaatcgaaaaagaagactaaaaataaa 684
Query: 2247 acatcaaaaactccagaaccagaagaacaacccaagaataaagaatcagataaaacagaa 2306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acatcaaaaactccagaaccagaagaacaacccaagaataaagaatcagataaaacagaa 744
Query: 2307 agatggggacatgatggattttacgacacttacggaaaagacgccaggagaaatgaagtc 2366
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agatggggacatgacggattttacgacacttacggaaaagacgccaggagaaatgaagtc 804
Query: 2367 agttctggaaggaacgggagggaaaaaggtgaaaatactagaagcaggcgcgacttacaa 2426
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agctctggaaggaacgggagggaaaaaggtgaaaatactagaagcaggcgcgacttacaa 864
Query: 2427 aatggagaagaaaggcacaggaataatgacaggaggaacgaacgtgcagaagctgttagg 2486
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 865 aatggagaagaaaggcacaggaataacgacaggaggaacgaacgtgcagaagctgttagg 924
Query: 2487 aataggggcagagaagaacacagagacttggccaaagaaagagttggagaccgtgacaag 2546
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 925 aataggggcagagaagaacacagggacttggccaaagaaagagttggagaccgtgacaag 984
Query: 2547 aaagataaagggaatagggatagagacgccaacaatcgttatgatgataatgaaaatgac 2606
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 985 aaagataaagggaatagggatagagacgccaacaatcgttatgatgatactgaaaatgac 1044
Query: 2607 gttagtaagagacgtcacgctcgggactcacggaaagacagagatgacacgagatcgaag 2666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 gttagtaagagacgtcacgctcgggactcacggaaagacagagatgacacgagatcgaag 1104
Query: 2667 agaaatggaaaagaaacggaagaacatagacaacgagatgatcgcgaaaaggaaaacgga 2726
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 agaaatggaaaagaaatggaagaacatagacaacgagatgatcgcgaaaaggaaaacgga 1164
Query: 2727 aagaaagataggaaacgttacgaccgtgatgatgagagggaagctcggaagaagaaagac 2786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 aagaaagataggaaacgttacgaccgtgatgatgagagggaagctcggaagaagaaagac 1224
Query: 2787 gaacaggacaaagagaatagaacaagagatagagacggcgaggcaagcaaacgacacgac 2846
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 1225 gaacaggacaaagagaatagaacaagagaaagagacggcgagggaagcaaacgacacgac 1284
Query: 2847 cgagaggatgacataaacaagaatagcga 2875
||||||||||||| |||||||| ||||||
Sbjct: 1285 cgagaggatgacacaaacaagactagcga 1313
Score = 268 bits (135), Expect = 6e-71
Identities = 138/139 (99%)
Strand = Plus / Plus
Query: 1931 gacattacagcaagccttctcaggaatattcccaagggacaacccaaagaacactcggtt 1990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gacattacagcaagccttctcaggaatattcccaagggacaacccaaagaacactcggtt 200
Query: 1991 ctctatcaactttttcacatctataggactgggaggcttaacagatgaactgagagaaca 2050
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctatcaactttttcacatccataggactgggaggcttaacagatgaactgagagaaca 260
Query: 2051 tttgaagcagatgccaaag 2069
|||||||||||||||||||
Sbjct: 261 tttgaagcagatgccaaag 279
Score = 238 bits (120), Expect = 5e-62
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 2068 agaatgtgccgccacccatcacagagataaatattgatagtgaatcgagttcagactcca 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agaatgtgccgccacccatcacagagataaatattgatagtgaatcgagttcagactcca 496
Query: 2128 gctctagttccagcagctcagacagcagcagttccagctcaagcgactccagctctagtg 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gctctagttccagcagctcagacagcagcagttccagctcaagcgactccagctctagtg 556
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 1888 aatatatgggtttgaagaaattgaatgatcgcctcaaggatccg 1931
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aatatatgggtttgaagaaattgaatgatcgcctcaaggatccg 45
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 387,160
Number of extensions: 7043
Number of successful extensions: 7043
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7041
Number of HSP's successfully gapped: 4
Length of query: 3691
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3673
Effective length of database: 8,109,745
Effective search space: 29787093385
Effective search space used: 29787093385
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)