BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10071 (UTR included)
(1630 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3447_C1 1197 0.0
>BF14_3447_C1
Length = 762
Score = 1197 bits (604), Expect = 0.0
Identities = 609/611 (99%)
Strand = Plus / Plus
Query: 497 ggcgatggcaacgaaccgaagtgctcagaggccaaacggggcgcctcagactaaggtgtg 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ggcgatggcaacgaaccgaagtgctcagaggccaaacggggcgcctcagactaaggtgtg 211
Query: 557 ccagttcaagctggttctgttgggtgagtcggctgtgggcaagtcttcattggtgctacg 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ccagttcaagctggttctgttgggtgagtcggctgtgggcaagtcttcattggtgctacg 271
Query: 617 tttcgtgaagggtcagttccatgagtatcaagagagcactatcggagcagcattccttac 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tttcgtgaagggtcagttccatgagtatcaagagagcactatcggagcagcattccttac 331
Query: 677 acagacgctctgcctcgacgacaccactgtcaagtttgaaatttgggacacggcaggaca 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acagacgctctgcctcgacgacaccactgtcaagtttgaaatttgggacacggcaggaca 391
Query: 737 ggagagatatcacagcctagctcctatgtactaccggggagcgcaggccgccatcgtagt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggagagatatcacagcctagctcctatgtactaccggggagcgcaggccgccatcgtagt 451
Query: 797 ctacgacattactaatcaggacacattcggtcgcgccaagaactgggtgaaggagctcca 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctacgacattactaatcaggacacattcggtcgcgccaagaactgggtgaaggagctcca 511
Query: 857 gcggcaggcgtctccgtccatcgtgatcgctctggccgggaacaagagcgacctggccgc 916
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 512 gcggcaggcgtctccgtccatcgtgatcgctctagccgggaacaagagcgacctggccgc 571
Query: 917 caagaggatggtcgagttcgaggaggcgcaggcctacgccgacgagaacggcctgctctt 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 caagaggatggtcgagttcgaggaggcgcaggcctacgccgacgagaacggcctgctctt 631
Query: 977 catggagaccagcgccaagaccgccatgaacgttaacgatatattcctagctatcgcgaa 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 catggagaccagcgccaagaccgccatgaacgttaacgatatattcctagctatcgcgaa 691
Query: 1037 caagttaccaaagagcgaggtgtccagcggcggcgcggggaccagagtgctcaacgacgc 1096
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 692 caagttaccaaagagcgaggtgtccagcggcggcgcggggacnagagtgctcaacgacgc 751
Query: 1097 ggacgcgccgc 1107
|||||||||||
Sbjct: 752 ggacgcgccgc 762
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 181,309
Number of extensions: 5276
Number of successful extensions: 5276
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5276
Number of HSP's successfully gapped: 1
Length of query: 1630
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1613
Effective length of database: 8,119,229
Effective search space: 13096316377
Effective search space used: 13096316377
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)