BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10074 (UTR included)
(946 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A1A08 583 e-166
>BF01025A1A08
Length = 779
Score = 583 bits (294), Expect = e-166
Identities = 300/302 (99%)
Strand = Plus / Plus
Query: 131 aggtccggagagagctgcggtgattggtggtttcagtggtggcgctaacaccttgaattc 190
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 16 aggtccggagagagctgcggtgatcggtggtttcagtggtggcgccaacaccttgaattc 75
Query: 191 acaggatgatgaatatagatatgctggtgtcgaggatcctaagatcatgataaccacctc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 acaggatgatgaatatagatatgctggtgtcgaggatcctaagatcatgataaccacctc 135
Query: 251 cagagaaccgagcgccaggctgaagatgtttgtcaaggaattaagactaatcttcccgaa 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 cagagaaccgagcgccaggctgaagatgtttgtcaaggaattaagactaatcttcccgaa 195
Query: 311 cagccagcgaatgaatcgcggtggttatgaaatgtctcagctgatccacgcctgccgagc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cagccagcgaatgaatcgcggtggttatgaaatgtctcagctgatccacgcctgccgagc 255
Query: 371 taatgacgtaacggacttcatcgtagtacatgaacacagaggcatacctgacagcctggt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 taatgacgtaacggacttcatcgtagtacatgaacacagaggcatacctgacagcctggt 315
Query: 431 aa 432
||
Sbjct: 316 aa 317
Score = 85.7 bits (43), Expect = 1e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 777 aattccctcatctgatatttcacaacttcaagaccgatcttgg 819
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aattccctcatctgatatttcacaacttcaagaccgatcttgg 453
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 183,335
Number of extensions: 4802
Number of successful extensions: 4802
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4802
Number of HSP's successfully gapped: 2
Length of query: 946
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 929
Effective length of database: 8,119,229
Effective search space: 7542763741
Effective search space used: 7542763741
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)