BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10081 (UTR included)
(4525 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A2A02 1572 0.0
BF01053B2B12 535 e-151
>BF01045A2A02
Length = 848
Score = 1572 bits (793), Expect = 0.0
Identities = 826/839 (98%)
Strand = Plus / Plus
Query: 3220 tggtgtgcacgatcggcgtgtcggaccaggtgaagcccgaggcgcacctggccgtgtact 3279
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 10 tggtgtgcacgatcggcgtgtcggaccaggtgaagcctgaggcgcacctggccgtgtact 69
Query: 3280 gcctcaagaagatggggttggaggtgtgtctgctgacgggagacaacaagaagacggccg 3339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gcctcaagaagatggggttggaggtgtgtctgctgacgggagacaacaagaagacggccg 129
Query: 3340 cggccatagcgagacaggtgggaatcaataaggtgttcgcggaagtgctgccctcacaca 3399
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cggccatagccagacaggtgggaatcaataaggtgttcgcggaagtgctgccctcacaca 189
Query: 3400 aggtggccaaggtccaggagttacaggacaaggggcagaaggtggctatggtgggtgacg 3459
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 190 aggtggccaaggtccaggagttacaggacaaggggcagaaggtggccatggtgggtgacg 249
Query: 3460 gtgtcaatgactccccggcgctggctcgagctgatgtcggtgtagccatcgccagcggta 3519
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 250 gtgtcaatgactccccggcgctggctcgagctgatgtcggtgtagccatcgccagcggaa 309
Query: 3520 cggacgtggccgtggaagcagctgatttagtgcttatgaggagcgacctgctggacgtgg 3579
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 310 cggacgtggccgtggaagcagccgatttagtgcttatgaggagcgacctgctggacgtgg 369
Query: 3580 tgtcgtgcctgcagctgtcgcgggtcacggtgcgccgcatcaggatgaacttcgtgttcg 3639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgtcgtgcctgcagctgtcgcgggtcacggtgcgccgcatcaggatgaacttcgtgttcg 429
Query: 3640 cttccgtctacaacctgctgggcatcccgctagccagcggagccttcgcgctctacggcc 3699
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 430 cttccgtctacaacctgctgggcatcccgctggccagcggagccttcgcgctctacggcc 489
Query: 3700 tgcagctccagccgtggatggcgtccgctgctatggccatgagctcggtgtccgtggtgt 3759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgcagctccagccgtggatggcgtccgctgctatggccatgagctcggtgtccgtggtgt 549
Query: 3760 gctccagcctcctgctgaagaccttcaggaagccgacgatggagcagctgaaaactccag 3819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctccagcctcctgctgaagaccttcaggaagccgacgatggagcagctgaaaactccag 609
Query: 3820 agtatctccagtccttacaccaggaacagctggagcagctggaggcggtggcggttcacc 3879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agtatctccagtccttacaccaggaacagctggagcagctggaggcggtggcggttcacc 669
Query: 3880 gcggcctggacgagaagttggaccctcaggacaaaggcacgcctctggccaagttgttca 3939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gcggcctggacgagaagttggaccctcaggacaaaggcacgcctctggccaagttgttca 729
Query: 3940 cccgcagcaagtccaccgacgacttcctcctgcgcgaggaggacgacctgctgaccgtct 3999
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 730 cccgcagcaagtccaccgacgacttcctcctgcgcgaggagnacgacctgctgaccgtct 789
Query: 4000 ccttcataccgaagaggtcgagctaggagcagctgtccacagctgacgtcacgttacca 4058
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 790 ccttcataccgannnnntcgagctaggagcagctgtccacagctgatgtcacgttacca 848
>BF01053B2B12
Length = 435
Score = 535 bits (270), Expect = e-151
Identities = 279/282 (98%)
Strand = Plus / Plus
Query: 3916 gcacgcctctggccaagttgttcacccgcagcaagtccaccgacgacttcctcctgcgcg 3975
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacgcctctggccaagctgttcacccgcagcaagtccaccgacgacttcctcctgcgcg 60
Query: 3976 aggaggacgacctgctgaccgtctccttcataccgaagaggtcgagctaggagcagctgt 4035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggaggacgacctgctgaccgtctccttcataccgaagaggtcgagctaggagcagctgt 120
Query: 4036 ccacagctgacgtcacgttaccaatgttatgtacaaaatatatacctgatttatataaaa 4095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccacagctgacgtcacgttaccaatgttatgtacaaaatatatacctgatttatataaaa 180
Query: 4096 aatatattattatttggtatcgcaagtgaggctaacgtcgtggccgccgtctcaacccct 4155
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 aatatattattatttggtatcgcaagtgaggctaacgtcgtggcggccgtctcaacccct 240
Query: 4156 acgggtatggtttctgttatctatgcccgtagcgagtgttgc 4197
|||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 acgggtgtggtttctgttatctatgcccgtagcgagtgttgc 282
Score = 200 bits (101), Expect = 1e-50
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 4199 tctgatcagtattgctgtgtgtgtgtcttttcgaactttactcctgtaaatatatagatg 4258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tctgatcagtattgctgtgtgtgtgtcttttcgaactttactcctgtaaatatatagatg 370
Query: 4259 tgtattatatttttgtatggaaataaattatatatacaatc 4299
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgtattatatttttgtatggaaataaattatatatacaatc 411
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 374,025
Number of extensions: 7491
Number of successful extensions: 7491
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7490
Number of HSP's successfully gapped: 3
Length of query: 4525
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4507
Effective length of database: 8,109,745
Effective search space: 36550620715
Effective search space used: 36550620715
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)