BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10090 (UTR included)
(1642 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2H03 291 2e-78
BF01054B2B08 105 2e-22
BF14_736_C1 96 2e-19
BF01011A1B08 82 3e-15
BF01020B1H07 76 2e-13
BF01052B2H04 74 8e-13
BF01031B1D09 68 5e-11
>BF01037B2H03
Length = 830
Score = 291 bits (147), Expect = 2e-78
Identities = 174/183 (95%)
Strand = Plus / Minus
Query: 739 tccagtatccacaagaagtccattcatatcaaggcagcactattatggtatgggctggta 798
||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 187 tccagcatccacaagaagcccattcatatcaaggcagcattattatggtatgggctggta 128
Query: 799 ttcgtatcggtgcgcgaaccgatctcatttgtataagagggaacaacaatgcactgaaat 858
||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 127 ttcgtatcggtgcgcgaaccgatctgatttggataagagggaacataaatgcactgaaat 68
Query: 859 accgtaatgaggtagtggaacctgtgattatcccacacagggtacaaatgggtgaggagt 918
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 67 accgcaatgaggtagtggaacctgtgattatcccacacagggtacaaatgggtcaggagt 8
Query: 919 tcc 921
|||
Sbjct: 7 tcc 5
>BF01054B2B08
Length = 807
Score = 105 bits (53), Expect = 2e-22
Identities = 131/157 (83%)
Strand = Plus / Minus
Query: 526 cggatgctttgccaaccttagttgttgaggaaaacgctggggtgggaataagaaaattac 585
||||||| ||||||||||| |||||| ||||| | ||||||||||||| | || |
Sbjct: 805 cggatgcgttgccaaccttggttgtttaggaagtgggaggggtgggaataaagagatggc 746
Query: 586 aggaaagggtgggaacagggaaagggacactggccctctcacacatcggacgaaacgcag 645
|||||||||||||||||||||||||| || ||| ||||||| ||||| |||||||||||
Sbjct: 745 aggaaagggtgggaacagggaaagggcaaccggctctctcactcatcgaacgaaacgcag 686
Query: 646 tcattaatgactacttcacgccggatttctgtgagag 682
|||||| |||| ||| |||||| |||||||||||
Sbjct: 685 ccattaaagactgctttacgccgatcttctgtgagag 649
>BF14_736_C1
Length = 796
Score = 95.6 bits (48), Expect = 2e-19
Identities = 114/136 (83%)
Strand = Plus / Minus
Query: 547 ttgttgaggaaaacgctggggtgggaataagaaaattacaggaaagggtgggaacaggga 606
|||||||| |||| | |||||||||||||| |||| |||||||||||| |||| |||
Sbjct: 790 ttgttgagaaaaagggaggggtgggaataaggaaatggcaggaaagggtgagaacgcgga 731
Query: 607 aagggacactggccctctcacacatcggacgaaacgcagtcattaatgactacttcacgc 666
||||| || ||| ||||||| ||| ||||||||||||| || ||| |||||||||||||
Sbjct: 730 aagggcaaccggctctctcactcattggacgaaacgcagccactaaagactacttcacgc 671
Query: 667 cggatttctgtgagag 682
|| |||||||||||
Sbjct: 670 cgatcttctgtgagag 655
>BF01011A1B08
Length = 853
Score = 81.8 bits (41), Expect = 3e-15
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 590 aagggtgggaacagggaaagggacactggccctctcacacatcggacgaaacgcagtcat 649
||||||||||| |||||||||| | ||| ||||| |||| ||||||||||||||||
Sbjct: 15 aagggtgggaaaagggaaagggcaaacggctttctcattcatcagacgaaacgcagtcat 74
Query: 650 taatgactacttcacgccggatttctgtgagag 682
||||||||||||||||||| |||||||||||
Sbjct: 75 taatgactacttcacgccgatcttctgtgagag 107
>BF01020B1H07
Length = 733
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 629 catcggacgaaacgcagtcattaatgactacttcacgccggatttctgtgagag 682
|||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 16 catcagacgaaacgcagtcattaatgactacttcacgccgatcttctgtgagag 69
>BF01052B2H04
Length = 668
Score = 73.8 bits (37), Expect = 8e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 443 ttttttatgtaaaagatggcaaacgagcagacggcctacttgatgggca 491
|||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct: 159 ttttttatgttaaaggtggcaaacgagcagacggcctacttggtgggca 207
>BF01031B1D09
Length = 754
Score = 67.9 bits (34), Expect = 5e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 587 ggaaagggtgggaacagggaaagggacactggccctctcacacatcggacgaaacgcagt 646
|||||||| ||||| |||||||||| | | ||| ||||||| | |||||||||||||||
Sbjct: 636 ggaaagggagggaaaagggaaagggccgccggctctctcactcgtcggacgaaacgcagc 577
Query: 647 cattaatgactacttcacgccg 668
||| || | |||||||||||||
Sbjct: 576 cataaaaggctacttcacgccg 555
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,405
Number of extensions: 6009
Number of successful extensions: 6009
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 6006
Number of HSP's successfully gapped: 7
Length of query: 1642
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1625
Effective length of database: 8,119,229
Effective search space: 13193747125
Effective search space used: 13193747125
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)