BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10116 (UTR included)
(1244 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1390_C1 1641 0.0
>BF14_1390_C1
Length = 1389
Score = 1641 bits (828), Expect = 0.0
Identities = 852/860 (99%)
Strand = Plus / Plus
Query: 385 agcacctatttaatttaaaatttgctgtaaaagaactagagcgaaattcaaagaaatgcg 444
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 101 agcacctatttaatttaaaatttgctgtaaaagaactagaacgaaattcaaagaaatgcg 160
Query: 445 aaaaagaagagaagttagaaaaggacaaggcaaagaaagccatacaaaagggtaatatgg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aaaaagaagagaagttagaaaaggacaaggcaaagaaagccatacaaaagggtaatatgg 220
Query: 505 aagttgctagaatacatgccgaaaatgctataagacaaaagaatcaagctattaattacc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aagttgctagaatacatgccgaaaatgctataagacaaaagaatcaagctattaattacc 280
Query: 565 tcagaatgtctgcaagggttgatgctgtgtctagtagagtgcagaccgctcttactacaa 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcagaatgtctgcaagggttgatgctgtgtctagtagagtgcagaccgctcttactacaa 340
Query: 625 ggaaggtaacaaattcaatggcgggagttgtgaaagcaatggatgctgcaatgaaatcaa 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggaaggtaacaaattcaatggcgggagttgtgaaagcaatggatgctgcaatgaaatcaa 400
Query: 685 tgaatcttgagaagatatccactctgatggacaaatttgagagtcagtttgaggatctgg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgaatcttgagaagatatccactctgatggacaaatttgagagtcagtttgaggatctgg 460
Query: 745 atgttcagtcatcatacatggagaatgcaatgtcacaaacgactacaacaacagtacctc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atgttcagtcatcatacatggagaatgcaatgtcacaaacgactacaacaacagtacctc 520
Query: 805 agggtgacgttgaaaagctgttacagcaagtcgctgacgaggctggcttggagttgaaca 864
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 521 agggcgacgttgaaaagctgttacagcaagtcgctgacgaagctggcttggagttgaaca 580
Query: 865 tggaactgccatccggggtccccagcacgtcggtcggtacagccacagtagtttctcaag 924
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 581 tggaactgccatccggggtccccagcacgtcagtcggtacagccacagtagtttctcaag 640
Query: 925 aacaggatgaacttactcaaagactggctaggcttagacaagctgaataatactattatg 984
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 641 aacaggacgaacttactcaaagactggctaggcttagacaagctgaataatactattacg 700
Query: 985 gatataagatttaagttgattgctatataaggatatttgtttattgttgagtccagtaac 1044
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gatgtaagatttaagttgattgctatataaggatatttgtttattgttgagtccagtaac 760
Query: 1045 atgctgttaagaaaatatgttctatgattatttgtcgtgatgatatttaagaggcaaata 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 atgctgttaagaaaatatgttctatgattatttgtcgtgatgatatttaagaggcaaata 820
Query: 1105 ttttaataaaattgtattttgtttattcattaagattattcagtttagtaccaacttttc 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ttttaataaaattgtattttgtttattcattaagattattcagtttagtaccaacttttc 880
Query: 1165 ctaagttgatgttataacattctattataaaatacaaccatatctgaagacaggcagttt 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 881 ctaagttgatgttataacattctattataaaatacaaccatatctgaagacaggcagctt 940
Query: 1225 gaattcagctgcaaatacat 1244
||||||||||||||||||||
Sbjct: 941 gaattcagctgcaaatacat 960
Score = 196 bits (99), Expect = 6e-50
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 118 gtcacaattagtgaaaggcctttgcctgttctttttatttataaattttcgaaaaagccg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtcacaattagtgaaaggcctttgcctgttctttttatttataaattttcgaaaaagccg 61
Query: 178 tcaagctggggaacgaaatgtcatcgtctgctatggaaa 216
|||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcaagctggggaacgaaatgtcatcgtctgctatggaaa 100
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,048
Number of extensions: 3559
Number of successful extensions: 3559
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3559
Number of HSP's successfully gapped: 2
Length of query: 1244
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1227
Effective length of database: 8,119,229
Effective search space: 9962293983
Effective search space used: 9962293983
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)