BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10119 (UTR included)
(1771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3149_C1 928 0.0
BF01016B1A11 151 4e-36
BF01056B1D01 78 5e-14
>BF14_3149_C1
Length = 957
Score = 928 bits (468), Expect = 0.0
Identities = 471/472 (99%)
Strand = Plus / Plus
Query: 685 cgaacaaaagcagtaaacaggaccctcgttttacggacgtggttaagctgaacgactacc 744
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 144 cgaacaaaagcagtaaacaggaccctcgttttacggacgtggttaagctgaacgactatc 203
Query: 745 ttcaacacggcaggagacctcagttctgggaggagaattacgtaaagagggtgatggagg 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttcaacacggcaggagacctcagttctgggaggagaattacgtaaagagggtgatggagg 263
Query: 805 ccgtgcgtctcaaggagctggagatgaagcaggcggcggagatcctcggcgtcagttacg 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccgtgcgtctcaaggagctggagatgaagcaggcggcggagatcctcggcgtcagttacg 323
Query: 865 gcacgctgtacgggcggtacagggacgtgtacggctgcatcaacagaccttacaggatag 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcacgctgtacgggcggtacagggacgtgtacggctgcatcaacagaccttacaggatag 383
Query: 925 ctcatcacgtttggcaggcgaagggcccgtcagccataatggagcgtgtccagcgaggtg 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcatcacgtttggcaggcgaagggcccgtcagccataatggagcgtgtccagcgaggtg 443
Query: 985 acctctcgttacaaacggcggcgctggcgctgggggtcaaccccgctcacctgggtagct 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acctctcgttacaaacggcggcgctggcgctgggggtcaaccccgctcacctgggtagct 503
Query: 1045 atatggtggaggggggagataaagactgggaggtggagttggatccggctgtgaaggtgt 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atatggtggaggggggagataaagactgggaggtggagttggatccggctgtgaaggtgt 563
Query: 1105 cgcgctccgccaccgctaccactaatactaaaacaaggaaaattgataaggt 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cgcgctccgccaccgctaccactaatactaaaacaaggaaaattgataaggt 615
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 579 gatataggatccttcctacacactaaactcagagttgacggagacaacagcgctg 633
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatataggatccttcctacacactaaactcagagttgacggagacaacagcgctg 56
>BF01016B1A11
Length = 786
Score = 151 bits (76), Expect = 4e-36
Identities = 124/140 (88%)
Strand = Plus / Plus
Query: 1455 actaggtaccagccccggcttcgcacgggctctttacaaaaaatataatatagcctattt 1514
|||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 28 actaggtaccagccccggcttcgcacgggcactttagaaaaaatataaaatagcctattt 87
Query: 1515 aattctgagaattattaaacttatatattgataactataacattttgcgcccgattttaa 1574
|||| ||||||||| |||||||||||| |||||||| | | || | |||| ||||| ||
Sbjct: 88 aattttgagaattactaaacttatataatgataactttcaaatggtacgcctgatttaaa 147
Query: 1575 tgattgtaaaagtaatttat 1594
||||| |||||||||||||
Sbjct: 148 tgatttaaaaagtaatttat 167
Score = 147 bits (74), Expect = 7e-35
Identities = 113/124 (91%), Gaps = 4/124 (3%)
Strand = Plus / Plus
Query: 1648 ccgtatttatgtaaatagctttccaataaacgctttaagaatgaatatttttaaaagttt 1707
||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||
Sbjct: 185 ccgtatttatgtaaatagctttccaataaacgctttaggaatgaagatttttataagttg 244
Query: 1708 taaaatggatagtggatagtatgttatccttaaggtatagacatacgccaccgcggactt 1767
||| || |||| | ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 245 taagat---tagtag-tagtatgttatccttaaggtatagacatatgccaccgcggactt 300
Query: 1768 ttct 1771
||||
Sbjct: 301 ttct 304
>BF01056B1D01
Length = 838
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1461 taccagccccggcttcgcacgggctctttacaaaaaatataatatagcctatttaattct 1520
|||||||||||| || ||||| |||||||||||||||||| ||||||| ||||||| |
Sbjct: 287 taccagccccggatttccacggtttctttacaaaaaatataaaatagcctttttaatttt 346
Query: 1521 gagaattatta 1531
|||||||||||
Sbjct: 347 gagaattatta 357
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1644 agtaccgtatttatgtaaatagctttccaataaa 1677
||||||||||||||||||||||||||||||||||
Sbjct: 490 agtaccgtatttatgtaaatagctttccaataaa 523
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,714
Number of extensions: 17533
Number of successful extensions: 17533
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 17532
Number of HSP's successfully gapped: 7
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)