BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10156 (UTR included)
(1776 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B1H03 900 0.0
BF01043A1C02 626 e-179
>BF01015B1H03
Length = 630
Score = 900 bits (454), Expect = 0.0
Identities = 457/458 (99%)
Strand = Plus / Plus
Query: 1145 gatcgagtcagcaataacagatacataaccgacaaccacaacgccacctaccaaaataat 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gatcgagtcagcaataacagatacataaccgacaaccacaacgccacctaccaaaataat 232
Query: 1205 cgtacactaaaagtatctttaaaacttgctcttaacataaaggaagcggccggagacaga 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cgtacactaaaagtatctttaaaacttgctcttaacataaaggaagcggccggagacaga 292
Query: 1265 aacggttcatagtcattaatttcacttaaatgctctattaatatctttagtaaacacact 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aacggttcatagtcattaatttcacttaaatgctctattaatatctttagtaaacacact 352
Query: 1325 gtcacagtactcggagacaaactgatataaaattaattccaaagtgctgatctatctagc 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gtcacagtactcggagacaaactgatataaaattaattccaaagtgctgatctatctagc 412
Query: 1385 ctcactccattatacataggaactaatttatttctcacactgctggttatttggcagaca 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ctcactccattatacataggaactaatttatttctcacactgctggttatttggcagaca 472
Query: 1445 gagtcgggatcagcagcgagtgcatgaggtgtgcactcgtgtgatctctacaatgtaaac 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gagtcgggatcagcagcgagtgcatgaggtgtgcactcgtgtgatctctacaatgtaaac 532
Query: 1505 aactaaacaaacatatcaatatttaatactgtcggatagcggcaagtcagcttggaacgg 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aactaaacaaacatatcaatatttaatactgtcggatagcggcaagtcagcttggaacgg 592
Query: 1565 ctcacaataacatttaagtacaaataaaaaacaatatg 1602
||||||| ||||||||||||||||||||||||||||||
Sbjct: 593 ctcacaacaacatttaagtacaaataaaaaacaatatg 630
>BF01043A1C02
Length = 773
Score = 626 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Plus
Query: 172 aggtttcgtcgagatccacactcccaaaatcatctccgcggcgtccgagggcggcgccaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aggtttcgtcgagatccacactcccaaaatcatctccgcggcgtccgagggcggcgccaa 205
Query: 232 cgtcttcaccgtgtcctacttcaagagcaacgcctacctcgcgcagagcccgcagctgta 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cgtcttcaccgtgtcctacttcaagagcaacgcctacctcgcgcagagcccgcagctgta 265
Query: 292 caagcagatggcgatcgcggccgacttcgacaaggtgttcaccgtgggcgccgtgttccg 351
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 266 caagcagatggcgatcgcggccgatttcgacaaggtgttcaccgtgggcgccgtgttccg 325
Query: 352 ggcggaggactccaacactcaccgccatctcacggagttcgtcggcctggacctggagat 411
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 326 ggcggaggactccaacactcaccgccacctcacggagttcgtcggcctggacctggagat 385
Query: 412 gagcttcacgcatcactaccacgaggtgctggacaccatcggccagacgttcactgacat 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gagcttcacgcatcactaccacgaggtgctggacaccatcggccagacgttcactgacat 445
Query: 472 gttcaggggcttacaggaacagta 495
||||||||||||||||||||||||
Sbjct: 446 gttcaggggcttacaggaacagta 469
Score = 438 bits (221), Expect = e-122
Identities = 230/233 (98%)
Strand = Plus / Plus
Query: 493 gtacgcctcggagatagcgaccgtgggccagcagtacaaggtcgagccgttcaagttcct 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtacgcctcggagatagcgaccgtgggccagcagtacaaggtcgagccgttcaagttcct 600
Query: 553 ggacccgccgcttcggctggagttccctcaggctgtagagatgctccgggaggctggagt 612
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggacccgccgctgcggctggagttccctcaggctgtagagatgctccgggaggctggagt 660
Query: 613 aacaataagccccgaagatgacctttcgactcctgacgagaagctgctgggtcgcctcgt 672
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 661 aacaataagccccgaagatgacctctcaactcctgacgagaagctgctgggtcgcctcgt 720
Query: 673 ccggtctaagtacgacacggacttttacatcctggataaatacccgctcgctg 725
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccggtctaagtacgacacggacttttacatcctggataaatacccgctcgctg 773
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 155,373
Number of extensions: 2689
Number of successful extensions: 2689
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2689
Number of HSP's successfully gapped: 3
Length of query: 1776
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1759
Effective length of database: 8,119,229
Effective search space: 14281723811
Effective search space used: 14281723811
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)