BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10159 (UTR included)
(1933 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1B06 1219 0.0
BF01048B1B05 285 1e-76
>BF01058B1B06
Length = 739
Score = 1219 bits (615), Expect = 0.0
Identities = 618/619 (99%)
Strand = Plus / Plus
Query: 218 attaacgatttagaatgttgagatcaaaaaagaggatacatcacaagaaatacaaagtgc 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaacgatttagaatgttgagatcaaaaaagaggatacatcacaagaaatacaaagtgc 180
Query: 278 gttaagccatttggtagtgatcacgatggtggacgaagggcgacgagacccgtccaagcg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttaagccatttggtagtgatcacgatggtggacgaagggcgacgagacccgtccaagcg 240
Query: 338 agtcgttcgaaaaatggaacctccaattatagaagaaccacattgttgcttactttctgg 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtcgttcgaaaaatggaacctccaattatagaagaaccacattgttgcttactttctgg 300
Query: 398 taaagaggacaaccaactattttgctgccggtgtgcccataaaaggcgtccgtcacctct 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taaagaggacaaccaactattttgctgccggtgtgcccataaaaggcgtccgtcacctct 360
Query: 458 tacatgcttagcagtatgtttcctagttctcacctataatattatgggtggatttatatt 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacatgcttagcagtatgtttcctagttctcacctataatattatgggtggatttatatt 420
Query: 518 cttaactctagaaggccctaccggctcagcagaagagacatcagtagctgcgtccaaacc 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttaactctagaaggccctaccggctcagcagaagagacatcagtagctgcgtccaaacc 480
Query: 578 taatttaagccaaactcagaacggtgatcttcggtccaagacggttgaacgtctctggtc 637
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 taatttaagccaaactcagaacggtgatcttcggtccaagacggtcgaacgtctctggtc 540
Query: 638 aataacagaagatttgaatatattgtataaggaaaattggacaaaactagcagcaaaaga 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aataacagaagatttgaatatattgtataaggaaaattggacaaaactagcagcaaaaga 600
Query: 698 actaatggattttcaaaaggttttaatgacgacaataagaaagacagatacacctaacat 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actaatggattttcaaaaggttttaatgacgacaataagaaagacagatacacctaacat 660
Query: 758 gtcccgaacctatgaccctaccgactatcgttggacatttgctggcagctttctctatgc 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcccgaacctatgaccctaccgactatcgttggacatttgctggcagctttctctatgc 720
Query: 818 tttgaccttgattactact 836
|||||||||||||||||||
Sbjct: 721 tttgaccttgattactact 739
>BF01048B1B05
Length = 784
Score = 285 bits (144), Expect = 1e-76
Identities = 147/148 (99%)
Strand = Plus / Plus
Query: 905 cggaatacccatcataatgctttacctctcaactgtaggtgaagcacttgcgagaaactt 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggaatacccatcataatgctttacctctcaactgtaggtgaagcacttgcgagaaactt 60
Query: 965 tcgtgcgctctactcaaaactttgtccggcgcgacttaagagcagagacttccatactaa 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 tcgtgcgctctactcaaaactttgtccggcgcgacttaagagcagagacttccattctaa 120
Query: 1025 ggctgactgcattagacgctattcaggg 1052
||||||||||||||||||||||||||||
Sbjct: 121 ggctgactgcattagacgctattcaggg 148
Score = 206 bits (104), Expect = 1e-52
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1051 gggagacggcagagttgccgtcaataaactgtcacgaaaaacgagcgcatgtgagcttca 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggagacggcagagttgccgtcaataaactgtcacgaaaaacgagcgcatgtgagcttca 740
Query: 1111 aagttgacagttcgaatcccaccaagtttaacagtttaccgcgc 1154
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagttgacagttcgaatcccaccaagtttaacagtttaccgcgc 784
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,032
Number of extensions: 5611
Number of successful extensions: 5611
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5611
Number of HSP's successfully gapped: 3
Length of query: 1933
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1916
Effective length of database: 8,119,229
Effective search space: 15556442764
Effective search space used: 15556442764
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)