BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10192 (UTR included)
(1342 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2028_C1 1122 0.0
BF01053A2F12 258 2e-68
BF14_335_C2 109 1e-23
BF01031B2E06 94 7e-19
>BF14_2028_C1
Length = 873
Score = 1122 bits (566), Expect = 0.0
Identities = 587/594 (98%)
Strand = Plus / Minus
Query: 749 taaaataacattcacattcgaccgcttcaaagcgccgccaacatctctaacgctacggac 808
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 873 taaaataacattcacattcgagcgcttcgaagcgccgccaacatctctaacgctacggac 814
Query: 809 agactcactaacaatatttcgtatatataaataaaaacatcacaataacttcatcttcat 868
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 813 agactcactaacaatatttcgtatatataaataaaaacatcacaataactttatcttcat 754
Query: 869 atataagtaacgttataaaatttgttcgcgaaaaaaaaatactattaaaatatatatgtg 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 atataagtaacgttataaaatttgttcgcgaaaaaaaaatactattaaaatatatatgtg 694
Query: 929 ttcaatatgttttattgcacgcgacgcacgacgacaggcactgacttaacacgagtcaca 988
|||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||
Sbjct: 693 ttcaatatgttttattgcacgcgacgcacggcgacaggcactgacttcatacgagtcaca 634
Query: 989 cttaactgattacaataaaaatatgttcgagaagccccgaccgagctcgcgagcagggaa 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cttaactgattacaataaaaatatgttcgagaagccccgaccgagctcgcgagcagggaa 574
Query: 1049 cggcgagccggctcagaggcggggctgcgaggctgacaacgtgtataggcttacaaaaat 1108
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cggcgagccggctcataggcggggctgcgaggctgacaacgtgtataggcttacaaaaat 514
Query: 1109 atattctcgtatcacaacgatcggagatatagatactttataacaataacatactgtata 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atattctcgtatcacaacgatcggagatatagatactttataacaataacatactgtata 454
Query: 1169 ctatatacagggtggagcccagcgggcgaaccgctgcatctccgattattacttcacaga 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctatatacagggtggagcccagcgggcgaaccgctgcatctccgattattacttcacaga 394
Query: 1229 gctcgtcacatcggatacatagagtaagggtcgtgtccaccctgtataatgaaatgcttc 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gctcgtcacatcggatacatagagtaagggtcgtgtccaccctgtataatgaaatgcttc 334
Query: 1289 taaaagaccgcgttgtgagtggagctggtggggactacgcccctagatccatgt 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 taaaagaccgcgttgtgagtggagctggtggggactacgcccctagatccatgt 280
>BF01053A2F12
Length = 211
Score = 258 bits (130), Expect = 2e-68
Identities = 164/173 (94%), Gaps = 3/173 (1%)
Strand = Plus / Minus
Query: 853 ataacttcatcttcatatataagtaacgttataaaatttgttcgcgaaaaaaaaatacta 912
||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 184 ataactttatcttcatatgtaagtaacgttataaaatttgttcgcgaaaaaaaa-tacta 126
Query: 913 ttaaaatatatatgtgttcaatatgttttattgcacgcgacgcacgacgacaggcactga 972
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 125 ttaaaatatatatgtgttcaatatgttttattgcacgcgacgcacgacgagaggcactga 66
Query: 973 cttaacacgagtcacacttaactgattacaataaaaatatgttcgagaagccc 1025
||| | ||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 65 cttcatacgagtcacac--aactgattacaataaatatatgttcgagaagccc 15
>BF14_335_C2
Length = 1827
Score = 109 bits (55), Expect = 1e-23
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 526 ttttaaagcgctttgtgctaatagagctcacggttccttgggaaaccaacatccccaaag 585
||||||||||| | ||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 1256 ttttaaagcgcgctacgctaatagagcctacggttccttggaagaccaacatccccaaaa 1197
Query: 586 accatgccatcaagctcaacaaatattacgagctcactaagaatagg 632
|||||||||||||| ||||||| ||||| |||||||||| |||||||
Sbjct: 1196 accatgccatcaaggtcaacaagtattatgagctcactaggaatagg 1150
>BF01031B2E06
Length = 707
Score = 93.7 bits (47), Expect = 7e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 567 gaaaccaacatccccaaagaccatgccatcaagctcaacaaatattacg-agctcactaa 625
||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 626 gaatagg 632
|||||||
Sbjct: 496 gaatagg 502
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,485
Number of extensions: 4660
Number of successful extensions: 4660
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4656
Number of HSP's successfully gapped: 4
Length of query: 1342
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1325
Effective length of database: 8,119,229
Effective search space: 10757978425
Effective search space used: 10757978425
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)