BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10198 (UTR included)
(3991 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2557_C1 1469 0.0
BF01027B1E12 741 0.0
>BF14_2557_C1
Length = 773
Score = 1469 bits (741), Expect = 0.0
Identities = 765/773 (98%)
Strand = Plus / Plus
Query: 2278 attccccgaaagacgccgagccaaacggttttaagttccccgaccccaagaaggggggcc 2337
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 attcccccaaagacgccgagccaaacggttttaagttccccgaccccaagaagggggggc 60
Query: 2338 aggacaatcaggtgccctcccccacagagatggaccgatttcgctggcgtttcgattctg 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggacaatcaggtgccctcccccacagagatggaccgatttcgctggcgtttcgattctg 120
Query: 2398 cggcgtccatggtgttccacaacaagacggggctccccttgaccagcagccccgcgccgc 2457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggcgtccatggtgttccacaacaagacggggctccccttgaccagcagccccgcgccgc 180
Query: 2458 tgaggagaggcaacaattgttttgactttgacgactctattaacggcgtgtcaggcatta 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaggagaggcaacaattgttttgactttgacgactctattaacggcgtgtcaggcatta 240
Query: 2518 agagtgctctgtttcatcctataagccccccctccggggcgcccgcgtcccccgcggccc 2577
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 agagtgcactgtttcatcctataagccccccctccggggcccccgcgtcccccgcggccc 300
Query: 2578 gcaccccccctccccacaagcaggcgccctcacacaacaaactcaggatgggacccagca 2637
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaccccccctcctcacaagcaggcgccctcacacaacaaactcaggatgggacccagca 360
Query: 2638 cgggtctactggggagcttcgaggagtctgccctcaagggtcgtttggagcccgtggcga 2697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgggtctactggggagcttcgaggagtctgccctcaagggtcgtttggagcccgtggcga 420
Query: 2698 ccgtccacgggttcacagctgagctgggggcctcgggggccttttgtccgcctcaccgga 2757
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 ccgtccacgggttcacagctgagctgggggcctcgggggccttttgtccgccccaccgga 480
Query: 2758 agttgccagtcactgtgttcttctatgcccccggaggaaccaatgctccttatatgggtc 2817
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 481 agttgccagtcactgtcttcttctatgcccccggaggaaccaatgctccttacatgggtc 540
Query: 2818 atatcaacctgggcgcagccggctaccgcgtgtcccgctccgggacggtccaggtgtctc 2877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atatcaacctgggcgcagccggctaccgcgtgtcccgctccgggacggtccaggtgtctc 600
Query: 2878 tgttcaaccctcacggcacgctggtcaagatgttcgtggtgttgtacgacctgaccagca 2937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgttcaaccctcacggcacgctggtcaagatgttcgtggtgttgtacgacctgaccagca 660
Query: 2938 tgccgccgatggcgcgcacgttcctccgccagcgcaccctgtacatgccggccggggcgg 2997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgccgccgatggcgcgcacgttcctccgccagcgcaccctgtacatgccggccggggcgg 720
Query: 2998 agcacccgcagccccacctcgtgcacaaatggcttagatatctgatacatctg 3050
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agcacccgcagccccacctcgtgcacaaatggcttagatatctgatacatctg 773
>BF01027B1E12
Length = 688
Score = 741 bits (374), Expect = 0.0
Identities = 380/382 (99%)
Strand = Plus / Plus
Query: 2649 gggagcttcgaggagtctgccctcaagggtcgtttggagcccgtggcgaccgtccacggg 2708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gggagcttcgaggagtctgccctcaagggtcgtttggagcccgtggcgaccgtccacggg 366
Query: 2709 ttcacagctgagctgggggcctcgggggccttttgtccgcctcaccggaagttgccagtc 2768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttcacagctgagctgggggcctcgggggccttttgtccgcctcaccggaagttgccagtc 426
Query: 2769 actgtgttcttctatgcccccggaggaaccaatgctccttatatgggtcatatcaacctg 2828
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 427 actgtgttcttctatgcccccggaggaaccaatgctccttacatgggtcatatcaacctg 486
Query: 2829 ggcgcagccggctaccgcgtgtcccgctccgggacggtccaggtgtctctgttcaaccct 2888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggcgcagccggctaccgcgtgtcccgctccgggacggtccaggtgtctctgttcaaccct 546
Query: 2889 cacggcacgctggtcaagatgttcgtggtgttgtacgacctgaccagcatgccgccgatg 2948
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 547 cacggcacgctggtcaagatgttcgtggtgttgtacgacctcaccagcatgccgccgatg 606
Query: 2949 gcgcgcacgttcctccgccagcgcaccctgtacatgccggccggggcggagcacccgcag 3008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gcgcgcacgttcctccgccagcgcaccctgtacatgccggccggggcggagcacccgcag 666
Query: 3009 ccccacctcgtgcacaaatggc 3030
||||||||||||||||||||||
Sbjct: 667 ccccacctcgtgcacaaatggc 688
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,834
Number of extensions: 5512
Number of successful extensions: 5512
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5512
Number of HSP's successfully gapped: 2
Length of query: 3991
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3973
Effective length of database: 8,109,745
Effective search space: 32220016885
Effective search space used: 32220016885
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)