BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10208 (UTR included)
(1549 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B1A02 716 0.0
>BF01020B1A02
Length = 736
Score = 716 bits (361), Expect = 0.0
Identities = 379/385 (98%)
Strand = Plus / Plus
Query: 540 agatatacacctttaagagagaattggttaaaaatattcacacctatagtagaacactta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agatatacacctttaagagagaattggttaaaaatattcacacctatagtagaacactta 411
Query: 600 ttgttacaagtccgttttaatacaaaaactcgcaacgtcgagatcagagttggtccagag 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 412 ttgttacaagtccgttttaatacaaaaactcgcaacgtcgagatcagagttggtccggaa 471
Query: 660 acaaaagacattgctaatctacagaaagccgctgattttgttaaggcttttatatatggt 719
||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 472 acaaaagacatagcaaatctacagaaagccgctgattttgttaaggcttttatatacggt 531
Query: 720 tttgaagttgacgatgcactagccttactcagattggatgatttattcgttgaatccttt 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 532 tttgaagttgacgatgcactagccttactcagattggatgatttattcgttgaatcattt 591
Query: 780 gaaattaaggatgtgaaaacattgcaaggtgatcatttgggaagggctatcggcaggctg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaaattaaggatgtgaaaacattgcaaggtgatcatttgggaagggctatcggcaggctg 651
Query: 840 gccggtaaggcgggacggacaaagttcactatagagaatgtgactaagaccaggatagta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gccggtaaggcgggacggacaaagttcactatagagaatgtgactaagaccaggatagta 711
Query: 900 ttggccgactccaaaattcatatat 924
|||||||||||||||||||||||||
Sbjct: 712 ttggccgactccaaaattcatatat 736
Score = 260 bits (131), Expect = 6e-69
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 120 acaaacatcaataataattacaataactgatactttgataaatgttattttaagtgtact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 acaaacatcaataataattacaataactgatactttgataaatgttattttaagtgtact 111
Query: 180 ttataaaaatcaaatatggaagtggagaatataaatgtagaagaatttttgcccgccaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 ttataaaaatcaaatatggaagtggagaatataaatgtagaagaatttttgcccgccaaa 171
Query: 240 aaccctataaa 250
|||||||||||
Sbjct: 172 aaccctataaa 182
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,293
Number of extensions: 5543
Number of successful extensions: 5543
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5543
Number of HSP's successfully gapped: 2
Length of query: 1549
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1532
Effective length of database: 8,119,229
Effective search space: 12438658828
Effective search space used: 12438658828
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)