BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10227 (UTR included)
(2839 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_234_C1 2093 0.0
BF01043A1C06 246 2e-64
>BF14_234_C1
Length = 1858
Score = 2093 bits (1056), Expect = 0.0
Identities = 1086/1095 (99%), Gaps = 1/1095 (0%)
Strand = Plus / Plus
Query: 1531 aggagttcacagaaaatgaattccagaagtggcatcgagccatcaaggaggccaacaaga 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aggagttcacagaaaatgaattccagaagtggcatcgagccatcaaggaggccaacaaga 822
Query: 1591 agcctcccaccatggacttcgttaggaataagatactggaggttaaggacgcgctcatgt 1650
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 823 agcctcccaccatggacttcgttaggaacaagatactggaggttaaggacgcactcatgt 882
Query: 1651 acgagtttaaggaagaggatatagagaagattgtagcggagaaggagaggttcaggtcgc 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 acgagtttaaggaagaggatatagagaagattgtagcggagaaggagaggttcaggtcgc 942
Query: 1711 acccgaccaactacgccatgaagaaaacccagctcatgaaggagagagatgtagcacagc 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 acccgaccaactacgccatgaagaaaacccagctcatgaaggagagagatgtagcacagc 1002
Query: 1771 tgagaggtgacgaggaattggttctagaattaaactccaagcttcaggagctggaagaga 1830
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tgagnggtgacgaggaattggttctagaattaaactccaagcttcaggagctggaagaga 1062
Query: 1831 gagccagcgccctggacaagacgaggaccagctccatacagagcatcagctacatcaaca 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 gagccagcgccctggacaagacgaggaccagctccatacagagcatcagctacatcaaca 1122
Query: 1891 acaggaaccggaaactcaacgtggagacggccgagaaggccatcatggaggaggtgaaag 1950
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 acagaaaccggaaactcaacgtggagacggccgagaaggccatcatggaggaggtgaaag 1182
Query: 1951 ctatgaaggggaagaagatggacgatcccttcaccaggagacacaccaagcccgtcatga 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 ctatgaaggggaagaagatggacgatcccttcaccaggagacacaccaagcccgtcatga 1242
Query: 2011 acttcaagtcgcacggcgggagcagatcgcaggaactactgaagaacgagcagcaagcgg 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 acttcaagtcgcacggcgggagcagatcgcaggaactactgaagaacgagcagcaagcgg 1302
Query: 2071 cggagcagcagaaacagaaggacgaagaagagaggatagagaaggagaaagaggaagaga 2130
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1303 cggagcagcagaaacagaaggacgaagaagagagaatagagaaggagaaagaggaagaga 1362
Query: 2131 tactgaaccggccggtcgcgccccgcccgctcccgccggacggcagtttgtattctttac 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 tactgaaccggccggtcgcgccccgcccgctcccgccggacggcagtttgtattctttac 1422
Query: 2191 acgacttcgacatcaacatagaaatagatctccccgcgcccaagccggtgacgtcacact 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 acgacttcgacatcaacatagaaatagatctccccgcgcccaagccggtgacgtcacact 1482
Query: 2251 ccaaacagataaccataaaggtgaaggacgccggcccaaaaaggtcattgaacctggacg 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 ccaaacagataaccataaaggtgaaggacgccggcccaaaaaggtcattgaacctggacg 1542
Query: 2311 attacaagaagagacacggcctcatatagtgttacataacatagagatgataaggacaaa 2370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 attacaagaagagacacggcctcatatagtgttacataacatagagatgataaggacaaa 1602
Query: 2371 gacacttcaacacactttaaattatcaataagactattaaaacatctcatcccggcgacg 2430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 gacacttcaacacactttaaattatcaataagactattaaaacatctcatcccggcgacg 1662
Query: 2431 ttgcgcggcgaaagattcagtttacgagttacgacagacgggacggacacacgcggacgg 2490
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 ttgcacggcgaaagattcagtttacgagttacgacagacgggacggacacacgcggacgg 1722
Query: 2491 aaacacacacggagagatgacgagaaggaaatctggttaaaagaaatatgccgacatagt 2550
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1723 aaacacacacggagagatgacgagaaggaaatctggttaaaagaaatataccgacatagt 1782
Query: 2551 attaaaacgacctcatgctgtacaggatccg-ggcggtcctcacacacggcgctcggcgg 2609
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1783 attaaaacgacctcatgctgtacaggatccgaggcggtcctcacacacggcgctcggcgg 1842
Query: 2610 caggcggccggggac 2624
|||||||| ||||||
Sbjct: 1843 caggcggctggggac 1857
Score = 1701 bits (858), Expect = 0.0
Identities = 885/894 (98%)
Strand = Plus / Plus
Query: 641 gagagaagccgttgtagaagaaaagaggaaagaggaacgcgaagaggagaaagagagaga 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gagagaagccgttgtagaagaaaagaggaaagaggaacgcgaagaggagaaagagagaga 61
Query: 701 gaagcctccgcccagccccggggaggtgacagacgatcaaaaagatacagagagagatca 760
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 62 gaagcctccgcccagccccggggaggtgacagacgatcaaaaagatacagagagggatca 121
Query: 761 ggaccggtccgcctccccgctgttcggtgccaagactgagaggaagaggaacgtggacga 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggaccggtccgcctccccgctgttcggtgccaagactgagaggaagaggaacgtggacga 181
Query: 821 caggagagtgaacgctatggcggcgctcagggcccagagagacgcgcgacagaggaacgt 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caggagagtgaacgctatggcggcgctcagggcccagagagacgcgcgacagaggaacgt 241
Query: 881 ggagaccaaacagaaaaagagggcgctggagaggaaggaggaggacgacgaagcggatcc 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggagaccaaacagaaaaagagggcgctggagaggaaggaggaggacgacgaagcggatcc 301
Query: 941 ggaaataataggaggcaccagcaaacagagcgtcaagctgaaggcgtccgacatatactc 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggaaataataggaggcaccagcaaacagagcgtcaagctgaaggcgtccgacatatactc 361
Query: 1001 tgacgactcgggctcggactccgaggacaagtcacagggaaaaagaagctcctcgagttc 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgacgactcgggctcggactccgaggacaagtcacagggaaaaagaagctcctcgagttc 421
Query: 1061 ctccacatcagacgccgaggaagaagagaagaagagagagagagaggaagttgaagtgaa 1120
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 422 ctccacatcagacgccgaggaagaagagaagaagagagagagagaggaggtggaagtgaa 481
Query: 1121 gtacgcggacaccagggaacagataaataagctgaggcttagtaggttcaagttagagcg 1180
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 482 gtacgcggacaccagggaacagataaataaactgaggcttagtaggttcaagctagagcg 541
Query: 1181 tctcgtacatttacctttcttctcgcgcgtcgtgtccgggtgtttcgttcgtatcggcat 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tctcgtacatttacctttcttctcgcgcgtcgtgtccgggtgtttcgttcgtatcggcat 601
Query: 1241 cggcaataacaacggaaacccggtgtacagggtcgccgaaattatagatgtatacgagac 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cggcaataacaacggaaacccggtgtacagggtcgccgaaattatagatgtatacgagac 661
Query: 1301 ggcaaaggtgtataacttaggaaacacgaggactaacaagggcttcaagctgagacacgg 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggcaaaggtgtataacttaggaaacacgaggactaacaagggcttcaagctgagacacgg 721
Query: 1361 cacgcaggacagggtgtttaggctggagttcgtgagcaatcaggagttcacagaaaatga 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cacgcaggacagggtgtttaggctggagttcgtgagcaatcaggagttcacagaaaatga 781
Query: 1421 attccagaaatggcatcgagccatcaaggaagccaacaagaagcctcccaccatggactt 1480
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 782 attccagaagtggcatcgagccatcaaggaggccaacaagaagcctcccaccatggactt 841
Query: 1481 cgttaggaacaagatactggaggttaaggacgcgctcatgtacgagttcaagga 1534
||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 842 cgttaggaacaagatactggaggttaaggacgcactcatgtacgagtttaagga 895
>BF01043A1C06
Length = 707
Score = 246 bits (124), Expect = 2e-64
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 461 agagcaggagatattcaaacggatagagaggagagatctcatgaagacgaggtgggagat 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 agagcaggagatattcaaacggatagagaggagagatctcatgaagacgaggtgggagat 643
Query: 521 agaacgcaagctgcgactagcgaggcggtcagcggccgagagagacgtgtctcctactga 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agaacgcaagctgcgactagcgaggcggtcagcggccgagagagacgtgtctcctactga 703
Query: 581 gctg 584
||||
Sbjct: 704 gctg 707
Score = 123 bits (62), Expect = 2e-27
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 379 aggtgaagtgtcatcacactcatcggacaacgactccatagactccgaagaagaatttga 438
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aggtgtagtgtcatcacactcatcggacaacgactccatagactccgaagaagaatttga 508
Query: 439 tgatgg 444
||||||
Sbjct: 509 tgatgg 514
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,101
Number of extensions: 5774
Number of successful extensions: 5774
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5767
Number of HSP's successfully gapped: 4
Length of query: 2839
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2822
Effective length of database: 8,119,229
Effective search space: 22912464238
Effective search space used: 22912464238
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)