BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10260 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1B09 92 3e-18
BF01019B1G10 90 1e-17
BF01024A1H07 88 5e-17
BF14_729_C3 84 7e-16
BF14_729_C2 82 3e-15
BF01047B2B04 76 2e-13
BF01011A1H06 70 1e-11
BF01035X1C09 68 4e-11
BF01025A1D01 68 4e-11
>BF01012A1B09
Length = 841
Score = 91.7 bits (46), Expect = 3e-18
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 397 ttttattattttaaa-ctacataatcccgacgtttcggttactattcagcaaccgtgatc 455
||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 776 ttttattattttaaaactacataatcccgacgtttcggttacttttcagcagccgtgatc 835
Query: 456 ac 457
||
Sbjct: 836 ac 837
>BF01019B1G10
Length = 488
Score = 89.7 bits (45), Expect = 1e-17
Identities = 70/76 (92%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 384 ttactacgcgaatttttattattttaaa--ctacataatcccgacgtttcggttactatt 441
|||||||||||||||| ||||||||||| |||||||||||||||||||||||| || ||
Sbjct: 317 ttactacgcgaatttt-attattttaaaaactacataatcccgacgtttcggttcctttt 375
Query: 442 cagcaaccgtgatcac 457
||| ||||||||||||
Sbjct: 376 cagtaaccgtgatcac 391
>BF01024A1H07
Length = 726
Score = 87.7 bits (44), Expect = 5e-17
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 397 ttttattattttaaa-ctacataatcccgacgtttcggttactattcagcaaccgtgatc 455
||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 720 ttttattattttaaanctacataatncngacgtttcggttacttttcagcaaccgtgatc 661
Query: 456 ac 457
||
Sbjct: 660 ac 659
>BF14_729_C3
Length = 2041
Score = 83.8 bits (42), Expect = 7e-16
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 397 ttttattattttaaa-ctacataatcccgacgtttcggttactattcagcaaccgtgatc 455
||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1661 ttttattatttaaaaactacataatcccgacgtttcggttactttgcagcaaccgtgatc 1602
Query: 456 ac 457
||
Sbjct: 1601 ac 1600
>BF14_729_C2
Length = 1289
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 409 aaactacataatcccgacgtttcggttactattcagcaaccgtgatcac 457
|||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 588 aaactacatactcccgacgtttcggttacttttcagcaaccgtgatcac 540
>BF01047B2B04
Length = 762
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 396 tttttattattttaaactacataatcccgacgtttcggttactattcagcaaccgtgatc 455
||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 146 tttttattattttaaactaaatactcccgacgtttcgtttacttcgcagcaaccgtgatc 205
Query: 456 ac 457
||
Sbjct: 206 ac 207
>BF01011A1H06
Length = 739
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 411 actacataatcccgacgtttcggttactattcagcaaccgtgatcac 457
|||||||| ||||||||||||||||||| ||||| ||||||||||||
Sbjct: 518 actacatactcccgacgtttcggttacttttcagtaaccgtgatcac 472
>BF01035X1C09
Length = 778
Score = 67.9 bits (34), Expect = 4e-11
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 396 tttttattattttaaactacataatcccgacgtttcggttactattcagcaaccgtgatc 455
|||||||||| |||| |||||| ||||| |||||||||||||| | ||||||||||||||
Sbjct: 592 tttttattatcttaa-ctacattatcccaacgtttcggttactttgcagcaaccgtgatc 650
Query: 456 ac 457
||
Sbjct: 651 ac 652
>BF01025A1D01
Length = 764
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 420 tcccgacgtttcggttactattcagcaaccgtgatcac 457
||||||||||||||||||| ||||||||||||||||||
Sbjct: 435 tcccgacgtttcggttacttttcagcaaccgtgatcac 472
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,399
Number of extensions: 6686
Number of successful extensions: 6686
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6682
Number of HSP's successfully gapped: 9
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)