BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10271 (UTR included)
(1756 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2H06 1372 0.0
BF01018B1E12 749 0.0
>BF01031B2H06
Length = 716
Score = 1372 bits (692), Expect = 0.0
Identities = 708/716 (98%)
Strand = Plus / Plus
Query: 616 actatagtccaacaggtaaaaagtgtcgcagtaaatccgagctagtacgttatcttggtg 675
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 actatagtccaacaggtaaaaagtgtcgcagtnnntccgagctagtacgttatcttggtg 60
Query: 676 atagtgtgaacttgtcatattttgactatcaacaaggtcaactaaacacaatgctcctat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagtgtgaacttgtcatattttgactatcaacaaggtcaactaaacacaatgctcctat 120
Query: 736 gcaaggtcaagaagcaagctcgggcgcagtatgaatacaacaggggttttcgttccgatg 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaaggtcaagaagcaagctcgggcgcagtatgaatacaacaggggttttcgttccgatg 180
Query: 796 cctcacttgtgcctcctataagacagaccgcatctatatttaaacaaccagtaactgtct 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctcacttgtgcctcctataagacagaccgcatctatatttaaacaaccagtaactgtct 240
Query: 856 acaaaacacaggagagcaaagtcaagactgatctgaaacaaggaacacaagaaaaaccga 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaaaacacaggagagcaaagtcaagactgatctgaaacaaggaacacaagaaaaaccga 300
Query: 916 agcaattattctgggaaaaacgtctcgaaggcttaactgcatgtgatgccaatggtgtaa 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcaattattctgggaaaaacgtctcgaaggcttaactgcatgtgatgccaatggtgtaa 360
Query: 976 taggaaccacctcactgccaaagtacataaaacccttaggcccgtacacatcagatgcaa 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taggaaccacctcactgccaaagtacataaaacccttaggcccgtacacatcagatgcaa 420
Query: 1036 caacaatacaatcactcgctacagccttacatgtgtcatctcaaccaattacaggacaaa 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caacaatacaatcactcgctacagccttacatgtgtcatctcaaccaattacaggacaaa 480
Query: 1096 cgggatccaaacaaactatcatggagaatccaggggtttttttaaatccagagcagccgt 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgggatccaaacaaactatcatggagaatccaggggtttttttaaatccagagcagccgt 540
Query: 1156 tgatagcggctgtgactataacgaaggatgatctgcgtcgccaggaggagagagtggaga 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgatagcggctgtgactataacgaaggatgatctgcgtcgccaggaggagagagtggaga 600
Query: 1216 gggctcggctgagactgcaggaagccttggccaccgcataggaacacgtcggcgacggag 1275
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gggctcggctgnnnctgcaggaagccttggccaccgcataggaacacgtcggcgacggnn 660
Query: 1276 accaactcttcgccgccgaccaaacagatcccgagcacatgctgcccgactcaaca 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accaactcttcgccgccgaccaaacagatcccgagcacatgctgcccgactcaaca 716
>BF01018B1E12
Length = 592
Score = 749 bits (378), Expect = 0.0
Identities = 420/434 (96%)
Strand = Plus / Plus
Query: 1323 gactcaacagcagattcaccgagaccttccatatctgaatgtgtcgtcgatagcaccaac 1382
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gactcaacagcagattcaccgagaccttccatctctgaatgtgtcgtcgatagcaccaac 60
Query: 1383 taaactcaaactattaaactgaaaattacaataagttatttcataatagattttaatgat 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaactcaaactattaaactgaaaattacaataagttatttcataatagattttaatgat 120
Query: 1443 tagaattataatacaattaacttatttgtaattttaaacccattatccaatggtcatttg 1502
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaattataatacaattaacttatttgtaattttaaacccattatccaatggtcatttg 180
Query: 1503 tattatcatgtatttgttgttaagataatataagatatcaaggtaatgtaaaatttagct 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tattatcatgtatttgttgttaagataatataagatatcaaggtaatgtaaaatttagct 240
Query: 1563 acaaattttaaatcaggttagcattgaaagtgatcataattaaaataatatttcgtacta 1622
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 241 acaaattttaaatcaggttagcattgaaagtgatcataattaaaataatatgtagtacta 300
Query: 1623 tttggtttacataagagacgatctaaaatctaactaatcatcagtattggggtacagagt 1682
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttcatttacataagagacgatctaaaatctaactaatcatcagtattggggtacagagt 360
Query: 1683 aaatgtattttaccaacatcacgcacttgaatatccccataatgttcttgctatggaaat 1742
||||||||||||||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 361 aaatgtattttaccatcactgagtacttgagtatacccataatgttcttgctatggaaat 420
Query: 1743 attagtactaagaa 1756
||||||||||||||
Sbjct: 421 attagtactaagaa 434
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,311
Number of extensions: 5083
Number of successful extensions: 5083
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5082
Number of HSP's successfully gapped: 2
Length of query: 1756
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1739
Effective length of database: 8,119,229
Effective search space: 14119339231
Effective search space used: 14119339231
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)