BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10272 (UTR included)
(2971 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A2F01 1491 0.0
BF01005B1C09 1039 0.0
BF01015B1G05 246 2e-64
>BF01062A2F01
Length = 800
Score = 1491 bits (752), Expect = 0.0
Identities = 761/764 (99%)
Strand = Plus / Plus
Query: 363 cacaactttgggtcgtgttttaggcttccgttattcttttttgaaacataaacttgtaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 cacaactttgggtcgtgttttaggcttccgttattcttttttgaaacataaacttgtaat 96
Query: 423 tcgatgagaatgccgagcgcaacagtatttaatttttgaattaatgataggtttatatta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tcgatgagaatgccgagcgcaacagtatttaatttttgaattaatgataggtttatatta 156
Query: 483 tagaaataattataacacatggcgcagttagatttgcatgacactttcttaaacgatgaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tagaaataattataacacatggcgcagttagatttgcatgacactttcttaaacgatgaa 216
Query: 543 gaccacctgcatattacaaaacaaacaggaacattatccaaaagaaaaactgataaagaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaccacctgcatattacaaaacaaacaggaacattatccaaaagaaaaactgataaagaa 276
Query: 603 gagaaaatatcgccagaacatttagttaaagaggatatggcagacaaaattgcaacaatt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gagaaaatatcgccagaacatttagttaaagaggatatggcagacaaaattgcaacaatt 336
Query: 663 cttatgcacaactatgatggcaaattgtatggagaagatgatacatctcagccaacttca 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cttatgcacaactatgatggcaaattgtatggagaagatgatacatctcagccaacttca 396
Query: 723 tgtactgcaccaattatacctattgaagctacacgtaaaaaaaagaaaaggaagagatct 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgtactgcaccaattatacctattgaagctacacgtaaaaaaaagaaaaggaagagatct 456
Query: 783 cagatatcaatatgcctaacaaactgtcgttatgagtcgatccgtaaggtggcaagtgca 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cagatatcaatatgcctaacaaactgtcgttatgagtcgatccgtaaggtggcaagtgcg 516
Query: 843 tttggtatgagagaggtctctgaagaggaggcttggaacttttactggactgatatgagc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tttggtatgagagaggtctctgaagaggaggcttggaacttttactggactgatatgagc 576
Query: 903 gtgtctgtggaacgagccaaggagatgaagcggttccagaggataaatcacttccccggc 962
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 577 gtgtctgtggaacgagccaaggagatgaagaggttccagaggataaatcacttccccggc 636
Query: 963 atgcttgagatatgcagaaaggatttgttggcaagaaacttaaacagaatgcaaaaaata 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atgcttgagatatgcagaaaggatttgttggcaagaaacttaaacagaatgcaaaaaata 696
Query: 1023 tatcccaaagagtataacttctttccaaagacctggtgcctgcctgccgattttggcgag 1082
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 697 tatcccaaagagtataacttctttcctaagacctggtgcctgcctgccgattttggcgag 756
Query: 1083 gcactaaactatagtaaatctagaaagaacaagacgttcataat 1126
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gcactaaactatagtaaatctagaaagaacaagacgttcataat 800
Score = 71.9 bits (36), Expect = 6e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 252 gcaaaatttttatgaaaatcgtccaaacgaagtttc 287
||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaaaatttttatgaaaatcgtccaaacgaagtttc 36
>BF01005B1C09
Length = 664
Score = 1039 bits (524), Expect = 0.0
Identities = 537/542 (99%)
Strand = Plus / Plus
Query: 1902 tggcagactcagatacagtgggaagagacacatctcggtaacttccgacgcgtgtatcct 1961
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tggcagactcagatacagtgggaagagacacnnctcggtaacttccgacgcgtgtatcct 60
Query: 1962 gtgggcgagcagtacgccagtctgttccaacagccctcgggttcattatacacgggcacg 2021
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 gtgggcgagcagtacgccagtctgttccaacagccctcgggctcattatacacgggcacg 120
Query: 2022 gcctcctcacgggcgaggggagattgcgcacggttacagagagaggaattccagcaaacg 2081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcctcctcacgggcgaggggagattgcgcacggttacagagagaggaattccagcaaacg 180
Query: 2082 aaagcaaaagcagaagctctaaagaaaccttcgcaacccaagaccaaagaagacgatcag 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagcaaaagcagaagctctaaagaaaccttcgcaacccaagaccaaagaagacgatcag 240
Query: 2142 aaacctaaagaaaagaaagagaaggaaaaggagggagaaggtggtagtatgagcatcagc 2201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaacctaaagaaaagaaagagaaggaaaaggagggagaaggtggtagtatgagcatcagc 300
Query: 2202 gttacaactgacaagggtaaggttaaagttaaggaacaaaagaagaaggaagataagccg 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttacaactgacaagggtaaggttaaagttaaggaacaaaagaagaaggaagataagccg 360
Query: 2262 aaagtcgcttccaaaccgtccttgatgcaacaaacagtttcacctacagaggaaaaagag 2321
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 361 aaagtcgcttccaaaccgtccttgatgcaacaaacagttccaccgacagaggaaaaagag 420
Query: 2322 aaggagccgaagccgtcttacgtgacgtgttcgtatgagccggacgctatcgttgagaga 2381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaggagccgaagccgtcttacgtgacgtgttcgtatgagccggacgctatcgttgagaga 480
Query: 2382 gaagaaagagaaaggctcaatctattggctcagagggacttcctcatacgcagctatggg 2441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaagaaagagaaaggctcaatctattggctcagagggacttcctcatacgcagctatggg 540
Query: 2442 at 2443
||
Sbjct: 541 at 542
Score = 200 bits (101), Expect = 9e-51
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 2844 agatatatttggtaatgaaaaaaatgggtaccctgcgaccggaagatgaaagaaaatatg 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agatatatttggtaatgaaaaaaatgggtaccctgcgaccggaagatgaaagaaaatatg 610
Query: 2904 gagtttatggacgtttatcagtcgtgtctaattcacctaag 2944
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gagtttatggacgtttatcagtcgtgtctaattcacctaag 651
>BF01015B1G05
Length = 714
Score = 246 bits (124), Expect = 2e-64
Identities = 127/128 (99%)
Strand = Plus / Plus
Query: 1948 gacgcgtgtatcctgtgggcgagcagtacgccagtctgttccaacagccctcgggttcat 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 426 gacgcgtgtatcctgtgggcgagcagtacgccagtctgttccaacagccctcgggctcat 485
Query: 2008 tatacacgggcacggcctcctcacgggcgaggggagattgcgcacggttacagagagagg 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tatacacgggcacggcctcctcacgggcgaggggagattgcgcacggttacagagagagg 545
Query: 2068 aattccag 2075
||||||||
Sbjct: 546 aattccag 553
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 359,149
Number of extensions: 8054
Number of successful extensions: 8054
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8054
Number of HSP's successfully gapped: 5
Length of query: 2971
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2953
Effective length of database: 8,109,745
Effective search space: 23948076985
Effective search space used: 23948076985
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)