BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10280 (UTR included)
(5056 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_445_C1 1824 0.0
>BF14_445_C1
Length = 972
Score = 1824 bits (920), Expect = 0.0
Identities = 959/972 (98%)
Strand = Plus / Plus
Query: 3345 gacaacttgttcgaccaacgtcttctgcactcgttcctttgcaagttgttcactccgagg 3404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacaacttgttcgaccaacgtcttctgcactcgttcctttgcaagttgttcactccgagg 60
Query: 3405 tccttcgatgcggactttgctcttgtggctaatgtagacggcgcttccggtaaccaacgt 3464
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tccttcgatgcggactttgctcttgtggccaatgtagacggcgcttccggtaaccaacgt 120
Query: 3465 catattacaatgccggacggaaacagacgagatcacttccttaaatggatcgaagaactg 3524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catattacaatgccggacggaaacagacgagatcacttccttaaatggatcgaagaactg 180
Query: 3525 tcagacagacagacgccgtcttggctcggtctgcccaataatgctgaaaaggtgctgtta 3584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagacagacagacgccgtcttggctcggtctgcccaataatgctgaaaaggtgctgtta 240
Query: 3585 acaactcaaggcagcgacctggtgtcgaaattattgaagatgcaacagttagaagacgaa 3644
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 acaactcaaggcagcgacctggtgtcgaaactattgaagatgcaacagttagaagacgaa 300
Query: 3645 gaagagctcgcatacaacgcggccagccaggaccacgaccccaattctatagtagtagag 3704
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagagctagcatacaacgcggccagccaggaccacgaccccaattctatagtagtagag 360
Query: 3705 ggtgatggaagaccagcttggatgaagatattgcacgaaacagccaccagctggttgcag 3764
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 ggtgacggaagaccagcttggatgaagatattgcacgaaacagccaccagctggttacag 420
Query: 3765 ctgctgcctaaggaattgccaactcttcgtcgttcagtcgagaacatcaaggacccactg 3824
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgctgcctaaggaattgccaacccttcgtcgttcagtcgagaacatcaaggacccactg 480
Query: 3825 taccgtttcttcgagcgcgaagtggcggccggagcgtcactgctacaacaagtgttacac 3884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taccgtttcttcgagcgcgaagtggcggccggagcgtcactgctacaacaagtgttacac 540
Query: 3885 gacctacgtaatgtgatcgccatatgccagggcgagatgaagcagacgaatgagacccgt 3944
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacctacgaaatgtgatcgccatatgccagggcgagatgaagcagacgaatgagacccgt 600
Query: 3945 gcgatggtgggttcactagtacgtggcatgctacccagcggctggcgcaggtacgccgtc 4004
|||||||| |||||||| |||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 601 gcgatggtcggttcactggtacgtggcatgttaccaagcggctggcgcaggtacgccgtc 660
Query: 4005 gctagaggctgcaccgtacagcagtggatcgacgacttcgcgcgacgagtcacccagctc 4064
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 gctagaggctgcaccgtacagcagtggatcgacgacttcgcgcgacgagtcactcagctc 720
Query: 4065 gctaccgtgtccagtacactggccgaccaaggcgccaagagactccagagtatcccagtg 4124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gctaccgtgtccagtacactggccgaccaaggcgccaagagactccagagtatcccagtg 780
Query: 4125 tggctcggcggactgctcaatccggaagcgtacatcacagccacacgtcaatgtgtcgcg 4184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tggctcggcggactgctcaatccggaagcgtacatcacagccacacgtcaatgtgtcgcg 840
Query: 4185 caggctaactcgtggtccctcgaagaattgaacctacaggttacaattcccgacccgggg 4244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 caggccaactcgtggtccctcgaagaattgaacctacaggttacaattcccgacccgggg 900
Query: 4245 actccgacggagaacgcgcagatggagtggtcgttctcagtaactggcctcaaactacaa 4304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 actccgacggagaacgcgcagatggagtggtcgttctcagtaactggcctcaaactacaa 960
Query: 4305 ggagcgaccgtg 4316
||||||||||||
Sbjct: 961 ggagcgaccgtg 972
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 399,942
Number of extensions: 7158
Number of successful extensions: 7158
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7158
Number of HSP's successfully gapped: 1
Length of query: 5056
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5038
Effective length of database: 8,109,745
Effective search space: 40856895310
Effective search space used: 40856895310
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)