BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10281 (UTR included)
(2710 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B1D10 1388 0.0
>BF01053B1D10
Length = 775
Score = 1388 bits (700), Expect = 0.0
Identities = 718/724 (99%)
Strand = Plus / Plus
Query: 1544 cgttatggcgtcccttaagcacgaaaacctcgtccgtctgctgggctgtgtggtgttcag 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 cgttatggcgtcccttaagcacgaaaacctcgtccgtctgctgggctgtgtggtgttcag 111
Query: 1604 ttccaacggcagcacctgtatcgttacagagcactgcgcccagggttcacttctggacta 1663
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 112 ttccaacggcagcacctgtatcgttacagagcactgcgcccagggttcactgctggacta 171
Query: 1664 cctgcgcagtcgcggacggcactacgtcacgcagctcaatcaaatcaacttcgcctacga 1723
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 172 cctgcgcagtcgcggacggcactacgtcacgcagctcaatcagatcaacttcgcctacga 231
Query: 1724 tgcgtgttgcggtatggagtatttggagcgtcagcgcgtggtccaccgagatctggcggc 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tgcgtgttgcggtatggagtatttggagcgtcagcgcgtggtccaccgagatctggcggc 291
Query: 1784 tcgtaatgttctcatatcggcggagggcacggccaaggtcgcggacttcggcctagcgag 1843
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 292 tcgtaatgttctcatatcggcggagggcacggccaaggtcgcggacttcggtctagcgag 351
Query: 1844 gacggattccacccccgacgaccccgccgacgccctgcgggtacaggccaagctgcccat 1903
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gacggactccacccccgacgaccccgccgacgccctgcgggtacaggccaagctgcccat 411
Query: 1904 caagtggacggcgcccgaggcactcaagtacaacaaattttctaataaatctgacatgtg 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 caagtggacggcgcccgaggcactcaagtacaacaaattttctaataaatctgacatgtg 471
Query: 1964 gagcttcgggattcttctctgggagatctactctttcgggcgagtgccctaccctagaat 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gagcttcgggattcttctctgggagatctactctttcgggcgagtgccctaccctagaat 531
Query: 2024 cccattagccgaggttgtccgtcacgtggagcgcgggtaccgtatggaggcgcccgaggg 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cccattagccgaggttgtccgtcacgtggagcgcgggtaccgtatggaggcgcccgaggg 591
Query: 2084 ttgtccgggagggccgtacgatgtgatgagagcggcctggcacgctgaccctgcacagag 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ttgtccgggagggccgtacgatgtgatgagagcggcctggcacgctgaccctgcacagag 651
Query: 2144 accgactttcgccagcacgaggctcagactcgccgccataagggacgcggcgcatgctca 2203
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 652 accgaccttcgccagcacgaggctcagactcgccgccataagggatgcggcgcatgctca 711
Query: 2204 tcagtgaacattgctctatatatttgtcggatgttaaagcaactatataaagtgtcagcg 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tcagtgaacattgctctatatatttgtcggatgttaaagcaactatataaagtgtcagcg 771
Query: 2264 ctgt 2267
||||
Sbjct: 772 ctgt 775
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,389
Number of extensions: 5170
Number of successful extensions: 5170
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5170
Number of HSP's successfully gapped: 1
Length of query: 2710
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2693
Effective length of database: 8,119,229
Effective search space: 21865083697
Effective search space used: 21865083697
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)