BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10282 (UTR included)
(2017 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A2B04 1348 0.0
BF01010A2B05 90 2e-17
>BF01040A2B04
Length = 696
Score = 1348 bits (680), Expect = 0.0
Identities = 692/696 (99%)
Strand = Plus / Plus
Query: 417 ataagtggacaaatggtgttattgtgacatgtttcttaaatattaaaataaataagcaga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ataagtggacaaatggtgttattgtgacatgtttcttaaatattaaaataaataaacaga 60
Query: 477 catttttaatactgataagccaccatggaagagccaatattacgttatgaaaaaatagac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catttttaatactgataagccaccatggaagagccaatattacgttatgaaaaaatagac 120
Query: 537 ttcttgggcgaaggacagtttgctactgtgtataaagctcgcgatgtaaaaactgataaa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcttgggcgaaggacagtttgctactgtgtataaagctcgcgatgtaaaaactgataaa 180
Query: 597 atcgtggctgtcaagaaaattaagattggctctcgtttagaagcccaggatggaattaat 656
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 atcgtggctgtcaagaaaattaagattggctcccgtttagaagcccaggatggaattaat 240
Query: 657 cgtactgctctcagggaaatcaaacttttacaagaactacagcatattaacctcatcgga 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtactgctctcagggaaatcaaacttttacaagaactacagcatattaacctcatcgga 300
Query: 717 cttcttgatgtatttggacagaaatctaatgtttcattggtgtttgactttatggatact 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcttgatgtatttggacagaaatctaatgtttcattggtgtttgactttatggatact 360
Query: 777 gatttggaaatagttattaaggacagtagtattgtacttacacctgcaaatgtcaaatct 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatttggaaatagttattaaggacagtagtattgtacttacacctgcaaatgtcaaatct 420
Query: 837 tatatgataatgactttgaaaggtctggaatatttacatcagaattggatactgcacaga 896
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatatgataatgactttaaaaggtctggaatatttacatcagaattggatactgcacaga 480
Query: 897 gatctcaaaccaaataatttgctaattaatagagaaggtatattaaagataggtgatttt 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatctcaaaccaaataatttgctaattaatagagaaggtatattaaagataggtgatttt 540
Query: 957 ggtttagctaaagcatttggatcacctagcagaataaatacacaccaagtggtcacaagg 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtttagctaaagcatttggatcacctagcagaataaatacacaccaagtggtcacaagg 600
Query: 1017 tggtacagatctccagaacttctatttggtgcgaggcagtatggaactggtgttgatatg 1076
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 601 tggtacagatctccagaacttctatttggcgcgaggcagtatggaactggtgttgatatg 660
Query: 1077 tgggcggtgggatgtattttagctgaattactactc 1112
||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgggcggtgggatgtattttagctgaattactactc 696
>BF01010A2B05
Length = 745
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 1 taagcaatattaattctaaataaacaaataacaggacaaatcatc 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 taagcaatattaattctaaataaacaaataacaggacaaatcatc 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,321
Number of extensions: 5682
Number of successful extensions: 5682
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5682
Number of HSP's successfully gapped: 2
Length of query: 2017
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2000
Effective length of database: 8,119,229
Effective search space: 16238458000
Effective search space used: 16238458000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)