BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10289 (UTR included)
(1803 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1H07 109 2e-23
BF14_729_C2 94 9e-19
BF01037B2C03 78 5e-14
>BF01038B1H07
Length = 768
Score = 109 bits (55), Expect = 2e-23
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 1572 aagtgaaacttcgtaa--tgtggaaatgaaaataggaaggggtagtaattgattgctagt 1629
|||||||||||||| | |||||||||||||||||| |||| ||| |||||||| || |
Sbjct: 762 aagtgaaacttcgttaagtgtggaaatgaaaatagggagggatagaaattgatttttact 703
Query: 1630 gaactcatattgtctctttaagacaaactttataaacattgcgcacaattcaca 1683
||||||||||| | ||||||||| |||||||||||||||||| ||||||||||
Sbjct: 702 gaactcatattctttctttaagataaactttataaacattgcttacaattcaca 649
>BF14_729_C2
Length = 1289
Score = 93.7 bits (47), Expect = 9e-19
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 1579 acttcgtaatgtggaaatgaaaataggaaggggtagtaattgattgctagtgaactcata 1638
|||||| |||| |||||||||| |||||| | ||| ||| ||| |||| ||||||||
Sbjct: 1072 acttcgcaatgatgaaatgaaaaaaggaagagttagaaatcaatttttagtaaactcata 1013
Query: 1639 ttgtctctttaagacaaactttataaacattgcgcacaattcacatttgac 1689
|||| || ||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 1012 ttgtttcgttaagacaaactttataaacattgctcacaattcacctttgac 962
>BF01037B2C03
Length = 796
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 1569 aagaagtgaaacttcgtaatgtggaaatgaaaataggaaggggtagtaattgatt 1623
|||||||||||||| | ||||||||||||||||||||||||||| | ||||||||
Sbjct: 423 aagaagtgaaacttggcaatgtggaaatgaaaataggaaggggtggaaattgatt 477
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 162,188
Number of extensions: 3023
Number of successful extensions: 3023
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3022
Number of HSP's successfully gapped: 3
Length of query: 1803
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1786
Effective length of database: 8,119,229
Effective search space: 14500942994
Effective search space used: 14500942994
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)