BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10295 (UTR included)
(3202 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B1D01 918 0.0
BF14_793_C1 182 2e-45
>BF01030B1D01
Length = 475
Score = 918 bits (463), Expect = 0.0
Identities = 472/475 (99%)
Strand = Plus / Plus
Query: 1623 tatcagaaaggcagcaacagcaactccagcaacagcaactggagcgctctctgcagcaag 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatcagaaaggcagcaacagcaactccagcaacagcaactggagcgctctctgcagcaag 60
Query: 1683 cagcctcaggagcacacggacgccccctacaacgtactgggtttgacagtaggcgacata 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagcctcaggagcacacggacgccccctacaacgtactgggtttgacagtaggcgacata 120
Query: 1743 gagtcggagtggactgggtcggaccagtccctgttccgcgccctccacaaggtgttcccc 1802
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagtcggagtggacggggtcggaccagtccctgttccgcgccctccacaaggtgttcccc 180
Query: 1803 tccaactactgcgccatcgcccagctcatgctctccaagacttgtcagcaggtctacacg 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccaactactgcgccatcgcccagctcatgctctccaagacttgtcagcaggtctacacg 240
Query: 1863 tactggatccgcaccggacaagagcagtgccgcgtggaagccgagctgacgccgcccagg 1922
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 241 tactggatccgcaccggacaagagcagtgccgcgtggaggccgagctgaccccgcccagg 300
Query: 1923 aagaagaagaagaagcatcgcctgtggtccgtgcactgccgcaagatacagctcaagaag 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaagaagaagaagcatcgcctgtggtccgtgcactgccgcaagatacagctcaagaag 360
Query: 1983 gactccgcctcgcatcacgtctacaactacactccgtgcgatcatcccaaccagccgtgc 2042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gactccgcctcgcatcacgtctacaactacactccgtgcgatcatcccaaccagccgtgc 420
Query: 2043 gacagtctgtgtccgtgtctccagtcgcagaacttctgcgagaaattctgtcaat 2097
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacagtctgtgtccgtgtctccagtcgcagaacttctgcgagaaattctgtcaat 475
>BF14_793_C1
Length = 1615
Score = 182 bits (92), Expect = 2e-45
Identities = 107/112 (95%)
Strand = Plus / Plus
Query: 3091 tagcacttatctccttcggtcacacttttacaatagcaacataattatcaatttctgtct 3150
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tagcacttatctccttcgggcacacttttacaatatcaacataattatcaatttctgtct 60
Query: 3151 attcaagcaacttttacaaacaaaatatcacagaaaatagaagaaaatatta 3202
|||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 gttcatgcaacttttacaaccaaaatatcacagaaaatagaagaaaatatta 112
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 306,949
Number of extensions: 5735
Number of successful extensions: 5735
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5731
Number of HSP's successfully gapped: 2
Length of query: 3202
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3184
Effective length of database: 8,109,745
Effective search space: 25821428080
Effective search space used: 25821428080
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)