BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10304 (UTR included)
(1621 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2860_C1 2224 0.0
>BF14_2860_C1
Length = 1321
Score = 2224 bits (1122), Expect = 0.0
Identities = 1151/1158 (99%), Gaps = 2/1158 (0%)
Strand = Plus / Plus
Query: 465 ctttgatagcttcgttactgcagtaaatatagcaaaatggcaaaaaaaacctatgatctg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgatagcttcgttactgcagtaaatatagcaaaatggcaaaaaaaacctatgatctg 60
Query: 525 ctatttaaattattattaattggtgattctggagttggaaaaacgtgtatactatttaga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatttaaattattattaattggtgattctggagttggaaaaacgtgtatactatttaga 120
Query: 585 ttttcagataaccactttacaacaacgtttatttcaacaattggtatagattttaagatt 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttcagataaccactttacaacaacgtttatttcaacaattggtatagattttaagatt 180
Query: 645 aagactgttgaattacgaggaaagaaaatcaaactgcagatctgggatacggcaggccag 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagactgttgaattacgaggaaagaaaatcaaactgcagatctgggatacggcaggccag 240
Query: 705 gaacggttccacaccatcactacatcatattaccgtggggcgatggggatcatgctggtg 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacggttccacaccatcactacatcatattaccgtggggcgatggggatcatgctggtg 300
Query: 765 tatgatataacaaatgaaaaaacttttgatgatattgtgaagtggttaagaaatatagac 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgatataacaaatgaaaaaacttttgatgatattgtgaagtggttaagaaatatagac 360
Query: 825 gagcatgctaacgaggatgtggagaagatgatcctcggcaacaagtgtgacatggaggac 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcatgctaacgaggatgtggagaagatgatcctcggcaacaagtgtgacatggaggac 420
Query: 885 aagagagttgtcagcaaagagaggggagaagctatcgctcgcgagcacggcatccgcttc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagagagttgtcagcaaagagaggggagaagctatcgctcgcgagcacggcatccgcttc 480
Query: 945 atggagacgtcggccaagtcgaacaccaacatcgagcgcgccttctcggagctggcggag 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atggagacgtcggccaagtcgaacaccaacatcgagcgcgccttctcggagctggcggag 540
Query: 1005 gccatcctggacaagagcgcagggcgcgaggcggaggcggacctggcgcgcatcgccgtg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gccatcctggacaagagcgcagggcgcgaggcggaggcggacctggcgcgcatcgccgtg 600
Query: 1065 gagcgccgcccttcccgcgcg-cgcgggcgggcgcggcgccctgcctgctgctcgtagac 1123
||||||||||||||||||||| ||| || |||| ||| ||||||||||||||||||||
Sbjct: 601 gagcgccgcccttcccgcgcgccgcccgcccgcgccgcg-cctgcctgctgctcgtagac 659
Query: 1124 tcgctcgcctccacctccaccggcaccgccgcgtcccgtcccgtcccgtcggtcgtgtcg 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcgctcgcctccacctccaccggcaccgccgcgtcccgtcccgtcccgtcggtcgtgtcg 719
Query: 1184 cggtcgccgcctcgtcgccggcgggtcgtcctcgtctctattatttgtatatctcgcgtg 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cggtcgccgcctcgtcgccggcgggtcgtcctcgtctctattatttgtatatctcgcgtg 779
Query: 1244 ttatatctcctcgtgccgttccgatgtgggccgctccgttcgcctcgtgtttcgtatctc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ttatatctcctcgtgccgttccgatgtgggccgctccgttcgcctcgtgtttcgtatctc 839
Query: 1304 atcgtatgtcaatgtttcgatggatcctctctatctcctcggactccgtaacgtccgtaa 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 atcgtatgtcaatgtttcgatggatcctctctatctcctcggactccgtaacgtccgtaa 899
Query: 1364 cggcgccctcgtttttcgagctacattttttgtttttctcatagctttaagcgagagtga 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 cggcgccctcgtttttcgagctacattttttgtttttctcatagctttaagcgagagtga 959
Query: 1424 ttcgtgtgcaataattctctacaacgattatccaatgaatatcacggaaaataaatttgt 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 ttcgtgtgcaataattctctacaacgattatccaatgaatatcacggaaaataaatttgt 1019
Query: 1484 acatttttatcgtaatagttgtcgtcgttcgtcagtcttagatcgacgatagttagagta 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 acatttttatcgtaatagttgtcgtcgttcgtcagtcttagatcgacgatagttagagta 1079
Query: 1544 gcttgaatgacgtcacgcacgtcacgtgacgtcattagatggaaatggaaataatattga 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gcttgaatgacgtcacgcacgtcacgtgacgtcattagatggaaatggaaataatattga 1139
Query: 1604 aatattagtgtagttttt 1621
||||||||||||||||||
Sbjct: 1140 aatattagtgtagttttt 1157
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,297
Number of extensions: 5666
Number of successful extensions: 5666
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5664
Number of HSP's successfully gapped: 2
Length of query: 1621
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1604
Effective length of database: 8,119,229
Effective search space: 13023243316
Effective search space used: 13023243316
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)