BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10313 (UTR included)
(1918 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057A1B10 1544 0.0
>BF01057A1B10
Length = 787
Score = 1544 bits (779), Expect = 0.0
Identities = 785/787 (99%)
Strand = Plus / Plus
Query: 390 atttctagtcaatccccaacaaataacactccaaggcggctttatgtcttggaggcttag 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttctagtcaatccccaacaaataacactccaaggcggctttatgtcttggaggcttag 60
Query: 450 atgattaaaaaaaatgacgactgcgcgtgttaatgttgctttgtgagcgcaatgtcgata 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgattaaaaaaaatgacgactgcgcgtgttaatgttgctttgtgagcgcaatgtcgata 120
Query: 510 gagtacgtggtggtgagcgagggcgaacaagacgagcccatcgaactgcccaccgaggaa 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagtacgtggtggtgagcgagggcgaacaagacgagcccatcgaactgcccaccgaggaa 180
Query: 570 gacggttctctacttctgagcacaatatccgctcaattcgtgggcgctagcggcctgaaa 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacggttctctacttctgagcacaatatccgctcaattcgtgggcgctagcggcctgaaa 240
Query: 630 tatcgtgctggaggtcgacttcgtggacttcgtctgactgaggatcgagtgctgccgcca 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatcgtgctggaggtcgacttcgtggacttcgtctgactgaggatcgagtgctgccgcca 300
Query: 690 gctgaaggctggggagcacatcgttatttttgcgcctttccacgtgtggatataccaacc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgaaggctggggagcacatcgttatttttgcgcctttccacgtgtggatataccaacc 360
Query: 750 gctacaacaaggccacgttgctctgacctcatagtacttggtctgccttggaaaactggt 809
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 gctacaacaaggccacgttgctctgaccttatagtacttggtctgccttggaaaactggt 420
Query: 810 gaagaaacagttcgagagtatttttctacattcggtgatttgttaatggtacaagtaaaa 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagaaacagttcgagagtatttttctacattcggtgatttgttaatggtacaagtaaaa 480
Query: 870 cgggatacaaagacggggttatctaaaggttttggttttattaagtttgctgaatatgac 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgggatacaaagacggggttatctaaaggttttggttttattaagtttgctgaatatgac 540
Query: 930 gcccagcttcgtgctctgggtaggcggcatatgatcgatgggcgctggtgtgacgttcgt 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcccagcttcgtgctctgggtaggcggcatatgatcgatgggcgctggtgtgacgttcgt 600
Query: 990 attcctaacagtaaggatggcagttctgcagcgcaccgaaaagtctttgtgggtcgttgc 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attcctaacagtaaggatggcagttctgcagcgcaccgaaaagtctttgtgggtcgttgc 660
Query: 1050 accgaaagcctcacagctgatgatctacgtgaatactttggtgcatttggacaggtgaca 1109
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actgaaagcctcacagctgatgatctacgtgaatactttggtgcatttggacaggtgaca 720
Query: 1110 gatgtctttgtacccaaaccatttcgggcattcagttttgtaacatttctagatccagaa 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatgtctttgtacccaaaccatttcgggcattcagttttgtaacatttctagatccagaa 780
Query: 1170 gtagctc 1176
|||||||
Sbjct: 781 gtagctc 787
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,029
Number of extensions: 6671
Number of successful extensions: 6671
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6671
Number of HSP's successfully gapped: 1
Length of query: 1918
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1901
Effective length of database: 8,119,229
Effective search space: 15434654329
Effective search space used: 15434654329
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)