BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10315 (UTR included)
(2128 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3260_C1 2268 0.0
>BF14_3260_C1
Length = 1152
Score = 2268 bits (1144), Expect = 0.0
Identities = 1150/1152 (99%)
Strand = Plus / Plus
Query: 286 atgcttcaattaaataacattgagatccatagtcagcttgctttcaagaaaatactatca 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgcttcaattaaataacattgagatccatagtcagcttgctttcaagaaaatactatca 60
Query: 346 cagaagttaacttttattacaaaactttatgtatagatggaaaactgcgtctgttaagcg 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagaagttaacttttattacaaaactttatgtatagatggaaaactgcgtctgttaagcg 120
Query: 406 aatttcaacacatcactatctccattatttcagaaagaacattaataatttgagaaaaaa 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatttcaacacatcactatctccattatttcagaaagaacattaataatttgagaaaaaa 180
Query: 466 tgaatgtcgcgaggggagcagtgagcgcgggtcgcatgcgagcctggcgggtgcacgcct 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaatgtcgcgaggggagcagtgagcgcgggtcgcatgcgagcctggcgggtgcacgcct 240
Query: 526 acagcgccggaaccgaggagttgcggctggagagcgcgcgcgtgccgccgctgagggctc 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagcgccggaaccgaggagttgcggctggagagcgcgcgcgtgccgccgctgagggctc 300
Query: 586 ccgatcagctgcttgtgcgagtccacaccgcctccatcaacccactggacgtggccatgc 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgatcagctgcttgtgcgagtccacaccgcctccatcaacccactggacgtggccatgc 360
Query: 646 tcggcgggtacggttctcggatactgaacacgctgcggacgctggacggcaccgacctcg 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcggcgggtacggttctcggatactgaacacgctgcggacgctggacggcaccgacctcg 420
Query: 706 agttcccgctagtgccagggagggacttcgccggcgaagtcgtcgcagccggtgcgagtt 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agttcccgctagtgccagggagggacttcgccggcgaagtcgtcgcagccggtgcgagtt 480
Query: 766 gccggctgcgggtcggcgaccgcgtgtggggtgtggtcccgccgcacaggccgggctcgc 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccggctgcgggtcggcgaccgcgtgtggggtgtggtcccgccgcacaggccgggctcgc 540
Query: 826 atgcggagtacgtgacggtgcgcgagcgctggaccggccttgccccgcttgctctgtccg 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgcggagtacgtgacggtgcgcgagcgctggaccggccttgccccgcttgctctgtccg 600
Query: 886 acgaggaggcaggcggggcgctgtacgcggctctgagcgcgtgcgcggcgctccgggttg 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acgaggaggcaggcggggcgctgtacgcggctctgagcgcgtgcgcggcgctccgggttg 660
Query: 946 gaggccttccgccagggagacgcgcccgccgtccgccgcgcgtgttattactgggactgg 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaggccttccgccagggagacgcgcccgccgtccgccgcgcgtgttattactgggactgg 720
Query: 1006 gcggggtcggacacgtggcccttcagctgctcgtggacgctggcgccgaggtgatcgttg 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcggggtcggacacgtggcccttcagctgctcgtggacgctggcgccgaggtgatcgttg 780
Query: 1066 gctgctctgcggacctgtgtgagcgcgcgacctcgctcggtgccgcggcggcgctcgatc 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gctgctctgcggacctgtgtgagcgcgcgacctcgctcggtgccgcggcggcgctcgatc 840
Query: 1126 ggtcggcggctgactacgaccgcctcctcgaggagtccggcccgtacgaggtgatcgtgg 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggtcggcggctgactacgaccgcctcctcgaggagtccggcccgtacgaggtgatcgtgg 900
Query: 1186 actgtgcgggagtgggtggcgcggaggccggttcgcggcgctggaggttctcccggttcg 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 901 actgtgcgggagtgggtggcgcggaggccggttcgcggcgctggaggttctcccgattcg 960
Query: 1246 tgaccctgagctcgccgctgctccggcttacggacgcccgcgggctggtgggcgggggat 1305
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tgaccctgagttcgccgctgctccggcttacggacgcccgcgggctggtgggcgggggat 1020
Query: 1306 gtgcggcggcggcccagctagtcgccgatggcctgtccgcggcccggagcgcgcccgcac 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtgcggcggcggcccagctagtcgccgatggcctgtccgcggcccggagcgcgcccgcac 1080
Query: 1366 cgtcctcctgcccgccgcacgtccgctgggccttcttcgctccgtcctcggacgacatcg 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgtcctcctgcccgccgcacgtccgctgggccttcttcgctccgtcctcggacgacatcg 1140
Query: 1426 agacgctccgtc 1437
||||||||||||
Sbjct: 1141 agacgctccgtc 1152
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,630
Number of extensions: 10947
Number of successful extensions: 10947
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10945
Number of HSP's successfully gapped: 1
Length of query: 2128
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2111
Effective length of database: 8,119,229
Effective search space: 17139692419
Effective search space used: 17139692419
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)