BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10320 (UTR included)
(1741 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A2G10 1532 0.0
>BF01034A2G10
Length = 785
Score = 1532 bits (773), Expect = 0.0
Identities = 782/785 (99%)
Strand = Plus / Plus
Query: 354 ggtagaaataatgtcaaaagccgagtaaaagaacagactcatgattgtcgaaaattgaac 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtagaaataatgtcaaaagccgagtaaaagaacagactcatgattgtcgaaaattgaac 60
Query: 414 ataagcgtttgtgtcaatcattgtgtgcggctgtcaagaaaatagaaacttgtaatttaa 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataagcgtttgtgtcaatcattgtgtgcggctgtcaagaaaatagaaacttgtaatttaa 120
Query: 474 agttggaaaacaaatcaaattataaagatggcccgtgaaagtagtgctggttttgatagg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttggaaaacaaatcaaattataaagatggcccgtgaaagtagtgctggttttgatagg 180
Query: 534 cacattaccattttctctcctgagggcagactttatcaagtcgaatatgcactgaaagct 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacattaccattttctctcctgagggcagactttatcaagtcgaatatgcactgaaagct 240
Query: 594 atcaaccagggtgggctcacttctgtggctctgcgcgggacggatgcggccgtggtggca 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcaaccagggtgggctcacttctgtggctctgcgcgggacggatgcggccgtggtggca 300
Query: 654 gcgcagcgcaaggtgcccgaccgactactcgacccagcatctgtcacacatctctttaga 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgcagcgcaaggtgcccgaccgactactcgacccagcatctgtcacacatctctttaga 360
Query: 714 ctcaccgatagaattggatgtgttatgactggcatgacagcggacagtcgctcccaggta 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcaccgatagaattggatgtgttatgactggcatgacagcggacagtcgctcccaggta 420
Query: 774 cagcgtgcgcggtacgaggccgctaactggacctacaagtatggcagcgccgtgccagca 833
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 cagcgtgcgcggtatgaggccgctaattggacctacaagtatggcagcgccgtgccagca 480
Query: 834 cacgtgttgtgtcgtcgcgtggctgacgtgtcccaggtgtacacgcagaatgcagagatg 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cacgtgttgtgtcgtcgcgtggctgacgtgtcccaggtgtacacgcagaatgcagagatg 540
Query: 894 agaccgcttggctgcagtatgatgttgatcgcgtacgacgacgagaccggtccgtgcgtg 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaccgcttggctgcagtatgatgttgatcgcgtacgacgacgagaccggtccgtgcgtg 600
Query: 954 tacaagacggacccctccgggtactactgctcgtacaaggcggtggcagccggggccaag 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tacaagacggacccctccgggtactactgctcgtacaaggcggtggcagccggggccaag 660
Query: 1014 gccaccgacgctggcgcctacctggagaaaaaactcaagaagcgaggcgacctctccgag 1073
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccaccgacgccggcgcctacctggagaaaaaactcaagaagcgaggcgacctctccgag 720
Query: 1074 gacgacgccgtgcagctcgccgtcagctgcctggccgccgtgctcagcgtggacttcaaa 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gacgacgccgtgcagctcgccgtcagctgcctggccgccgtgctcagcgtggacttcaaa 780
Query: 1134 gccgc 1138
|||||
Sbjct: 781 gccgc 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 175,226
Number of extensions: 3899
Number of successful extensions: 3899
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3899
Number of HSP's successfully gapped: 1
Length of query: 1741
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1724
Effective length of database: 8,119,229
Effective search space: 13997550796
Effective search space used: 13997550796
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)