BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10325 (UTR included)
(2605 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2680_C1 1780 0.0
>BF14_2680_C1
Length = 1463
Score = 1780 bits (898), Expect = 0.0
Identities = 945/958 (98%), Gaps = 2/958 (0%)
Strand = Plus / Plus
Query: 262 tatgtggtccagaaagttaatttagttaagttgaggcgtgatctcattctatgaaataaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgtggtccagaaagttaatttagttaagttgaggcgtgatctcattctatgaaataaa 60
Query: 322 acggtgagacaattcgggctgtgtattgataaattaataattttaaacatttaagaggcc 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acggtgagacaattcgggctgtgtattgataaattaataattttaaacatttaagaggcc 120
Query: 382 acaaaaattttcatgacgacctgattattgcgaggtgtttagacgtagatacataaatag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaaaaattttcatgacgacctgattattgcgaggtgtttagacgtagatacataaatag 180
Query: 442 tgttaattaagtgttcgctatcgtaggactaggggcgcggcgcgtggcacgaaatcacca 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttaattaagtgttcgctatcgtaggactaggggcgcggcgcgtggcacgaaatcacca 240
Query: 502 tggatgatgaccagcagttctgtctgcggtggaataaccaccaatcgacgctggtttcag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggatgatgaccagcagttctgtctgcggtggaataaccaccaatcgacgctggtttcag 300
Query: 562 tgtttgatactttgttagtgaaagaaattcacgtggactgcacattagctgccgaaggga 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtttgatactttgttagtgaaagaaattcacgtggactgcacattagctgccgaaggga 360
Query: 622 gaacactaaaggcacacaaagtggttttgtctgcgtgcagtccatatttcgagagtgtat 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaacactaaaggcacacaaagtggttttgtctgcgtgcagtccatatttcgagagtgtat 420
Query: 682 tatccgaacagtttgacaaacatccaataatcattttaaaagatgtcaaatttgctgaac 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatccgaacagtttgacaaacatccaataatcattttaaaagatgtcaaatttgctgaac 480
Query: 742 tgagagcaatgatggattatatgtaccgcggagaggtgaacatctctcaagaccaactgg 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgagagcaatgatggattatatgtaccgcggagaggtgaacatctctcaagaccaactgg 540
Query: 802 ctgccctgctgaaggcagcagagtcacttcaaatcaagggtctctcagataacaagccat 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgccctgctgaaggcagcagagtcacttcaaatcaagggtctctcagataacaagccat 600
Query: 862 ccaggccaccgtcgcgccctcccccagcacccgcacacccgcctcgcgctccgtctccac 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaggccaccgtcgcgccctcccccagcacccgcacacccgcctcgcgctccgtctccac 660
Query: 922 ctccacaaacgagagatggcagctcggacagtcgctcggggtctctgagtccatcgagac 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctccacaaacgagagatggcagctcggacagtcgctcggggtctctgagtccatcgagac 720
Query: 982 ggcgtaagaaagcgcggcgcacgtccagccccgtgccacccgcgg-gcgggcgcgggcgg 1040
||||||||||||||||||||||||||||||||||||||||||||| || |||| || |
Sbjct: 721 ggcgtaagaaagcgcggcgcacgtccagccccgtgccacccgcggcgcccgcgcccgccg 780
Query: 1041 cggtcgggcgagccgccctgcaaggaggagctggcccgggacgtggaagacctcacgctg 1100
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccagc-cccgagccgccctgcaaggaggagctggcccgggacgtggaagacctcacgctg 839
Query: 1101 gacgacgctcacaccccgcccgcggaccacaacgatgtcgtgcgcaattttcaatggcat 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gacgacgctcacaccccgcccgcggaccacaacgatgtcgtgcgcaattttcaatggcat 899
Query: 1161 atggaaagatctcaagatgaaattatgaattcaaatgacagcgttcgagagaatcaag 1218
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 atggaaagatcccaagatgaaattatgaattcaaatgacagcgttcgagagaatcaag 957
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,342
Number of extensions: 4103
Number of successful extensions: 4103
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4103
Number of HSP's successfully gapped: 2
Length of query: 2605
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2588
Effective length of database: 8,119,229
Effective search space: 21012564652
Effective search space used: 21012564652
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)