BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN10328 (UTR included)
(1540 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2G01 1497 0.0
>BF01055B2G01
Length = 780
Score = 1497 bits (755), Expect = 0.0
Identities = 767/772 (99%)
Strand = Plus / Plus
Query: 272 attttcaacatcaaattacaaaaggataactatttgagaatgttatagaataaagattta 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 attttcaacatcaaattacaaaaggataactatttgagaatgttatagaataaagattta 68
Query: 332 aataattatgaatagattagcgtctatgactaggtgttatctcaccacatatagaagtag 391
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 69 aataattatgaatagattagcgtctatgactaggtgttatctcacctcatatagaagtag 128
Query: 392 tgtttatagaacgccatgccatatactagttccaaaaaacactttaccgaatgtatttac 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgtttatagaacgccatgccatatactagttccaaaaaacactttaccgaatgtatttac 188
Query: 452 tattcgaggtgcccatgaacagaagaaaattaggtctactctgaattatatgatagcgct 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tattcgaggtgcccatgaacagaagaaaattaggtctactctgaattatatgatagcgct 248
Query: 512 tggtgttatgactgtaggtttaagttacgccgcagtaccattatataggatattttgtca 571
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 249 tggtgttatgactgtaggtttaagttacgccgcagtaccattatataggattttttgtca 308
Query: 572 ggcctacagttatggtggcacaacagctcaagcagaggccaatgagacaataagtaaaat 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggcctacagttatggtggcacaacagctcaagcagaggccaatgagacaataagtaaaat 368
Query: 632 gaatgctgtcaaggaaaggcccattaagataaggtttaatgctgatgtggcttcttccat 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gaatgctgtcaaggaaaggcccattaagataaggtttaatgctgatgtggcttcttccat 428
Query: 692 gcagtggaactttaagcctcaacaagttgacataacggtagttccaggtgagacggcttt 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcagtggaactttaagcctcaacaagttgacataacggtagttccaggtgagacggcttt 488
Query: 752 agcattttacacagctcgcaatcccacagacaaaccggtgattggtattagcacatataa 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agcattttacacagctcgcaatcccacagacaaaccggtgattggtattagcacatataa 548
Query: 812 tgtgatccctttcgatgccggacagtatttcaataaaatacagtgcttctgcttcgagga 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgtgatccctttcgatgccggacagtatttcaataaaatacagtgcttctgcttcgagga 608
Query: 872 acaacagttgaatcctcatgaacaggtggacatgccggtgttcttctacattgatccaga 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 acaacagttgaatcctcatgaacaggtggacatgccggtgttcttctacattgatccaga 668
Query: 932 gtttatggaagatcccaagatggaatttgtcgatgaaattgtgttgtcttacacattctt 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gtttatggaagatcccaagatggaatttgtcgatgaaattgtgttgtcttacacattctt 728
Query: 992 tgaagctaaagaaggcttgaaattaccaatgcctgcatatgccaagtagtgc 1043
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgaagctaaagannncttgaaattaccaatgcctgcatatgccaagtagtgc 780
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 174,092
Number of extensions: 3313
Number of successful extensions: 3313
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3313
Number of HSP's successfully gapped: 1
Length of query: 1540
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1523
Effective length of database: 8,119,229
Effective search space: 12365585767
Effective search space used: 12365585767
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)